RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 OR52B2Q96RD2 323 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 FAM83DQ9H4H8 585 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 ZNF318Q5VUA4 2279 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 ZNF726A6NNF4 738 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 PCDH7O60245 1069 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 LATS1O95835 1130 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 GOT2P00505 430 aaKnown RBP18.85■□□□□ 0.61
HDAC4-201ENST00000345617 RBMXP38159 391 aaKnown RBP18.85■□□□□ 0.61
HDAC4-201ENST00000345617 JPH3Q8WXH2 748 aaPredicted RBP18.85■□□□□ 0.61
HDAC4-201ENST00000345617 ADAM2Q99965 735 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 RPF2Q9H7B2 306 aaKnown RBP18.85■□□□□ 0.61
HDAC4-201ENST00000345617 PAK1IP1Q9NWT1 392 aaPredicted RBP18.85■□□□□ 0.61
HDAC4-201ENST00000345617 SRRDQ9UH36 339 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 ST3GAL4Q11206 333 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 TMEM199Q8N511 208 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 INMT-MINDY4F8WBC2 141 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 BUD23O43709 281 aaKnown RBP18.85■□□□□ 0.61
HDAC4-201ENST00000345617 SNRNP200O75643 2136 aaKnown RBP18.85■□□□□ 0.61
HDAC4-201ENST00000345617 POP4O95707 220 aaKnown RBP18.85■□□□□ 0.61
HDAC4-201ENST00000345617 FCER2P06734 321 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 THEGLP0DJG4 465 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 TMEM69Q5SWH9 247 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 TSTD2Q5T7W7 516 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 ST6GALNAC4Q9H4F1 302 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 BIN3Q9NQY0 253 aa18.85■□□□□ 0.61
HDAC4-201ENST00000345617 TGFBIQ15582 683 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 HSDL2Q6YN16 418 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 SPPL2BQ8TCT7 592 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 KLHL15Q96M94 604 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 HCN4Q9Y3Q4 1203 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 A0A0U1RQJ8 604 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 EME2A4GXA9 379 aaPredicted RBP18.84■□□□□ 0.61
HDAC4-201ENST00000345617 TPST2O60704 377 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 SLC16A8O95907 504 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 SMAD3P84022 425 aaKnown RBP18.84■□□□□ 0.61
HDAC4-201ENST00000345617 CLEC12AQ5QGZ9 265 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 OR4K3Q96R72 315 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 SERINC1Q9NRX5 453 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 SH2B3Q9UQQ2 575 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 KIAA1161Q6NSJ0 714 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 OR7G2Q8NG99 324 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 CHPT1Q8WUD6 406 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 ARL11Q969Q4 196 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 MRPS30Q9NP92 439 aaKnown RBP18.84■□□□□ 0.61
HDAC4-201ENST00000345617 ERVK-19Q9WJR5 959 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 ITGA5P08648 1049 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 MARVELD2Q8N4S9 558 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 OR8J3Q8NGG0 315 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 PIKFYVEQ9Y2I7 2098 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 SPATA31C2B4DYI2 1134 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 NKX6-1P78426 367 aaPredicted RBP18.84■□□□□ 0.61
HDAC4-201ENST00000345617 ZSWIM9Q86XI8 627 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 CPA6Q8N4T0 437 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 COPS5Q92905 334 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 MALSU1Q96EH3 234 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 AGPSO00116 658 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 SSX5O60225 188 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 MT-CO2P00403 227 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 MYCLP1P12525 358 aaPredicted RBP18.84■□□□□ 0.61
HDAC4-201ENST00000345617 ANKRD36CQ5JPF3 1778 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 MYPNQ86TC9 1320 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 KIAA0319LQ8IZA0 1049 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 ZNF317Q96PQ6 595 aaPredicted RBP18.84■□□□□ 0.61
HDAC4-201ENST00000345617 ACP6Q9NPH0 428 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 MS4A12Q9NXJ0 267 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 MRPS23Q9Y3D9 190 aaKnown RBP18.84■□□□□ 0.61
HDAC4-201ENST00000345617 HCKP08631 526 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 NDUFS1P28331 727 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 PTGIRP43119 386 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 HCAR3P49019 387 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 CANT1Q8WVQ1 401 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 ZNF649Q9BS31 505 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 UCK2Q9BZX2 261 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 MGAT4BQ9UQ53 548 aa18.84■□□□□ 0.61
HDAC4-201ENST00000345617 ITM2AO43736 263 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 VIPP01282 170 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 IFNA5P01569 189 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 TUBG1P23258 451 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 FAM182BQ5T319 152 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 DENRO43583 198 aaKnown RBP18.83■□□□□ 0.61
HDAC4-201ENST00000345617 CRYZL1O95825 349 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 FAPQ12884 760 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 C2orf15Q8WU43 125 aaKnown RBP18.83■□□□□ 0.61
HDAC4-201ENST00000345617 TTPALQ9BTX7 342 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 ZNF696Q9H7X3 374 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.83■□□□□ 0.61
HDAC4-201ENST00000345617 TMEM131LA2VDJ0 1609 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 ZNF630Q2M218 657 aaPredicted RBP18.83■□□□□ 0.61
HDAC4-201ENST00000345617 CARM1Q86X55 608 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 CIDECQ96AQ7 238 aaPredicted RBP18.83■□□□□ 0.61
HDAC4-201ENST00000345617 MTERF1Q99551 399 aaKnown RBP18.83■□□□□ 0.61
HDAC4-201ENST00000345617 GPATCH2Q9NW75 528 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 ASB4Q9Y574 426 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 CNTNAP1P78357 1384 aa18.83■□□□□ 0.61
HDAC4-201ENST00000345617 PQBP1O60828 265 aaKnown RBP18.83■□□□□ 0.6
HDAC4-201ENST00000345617 HOXB9P17482 250 aaPredicted RBP18.83■□□□□ 0.6
HDAC4-201ENST00000345617 RAB5CP51148 216 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 PPP5CP53041 499 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 GPR33Q49SQ1 333 aa18.83■□□□□ 0.6
HDAC4-201ENST00000345617 COL3A1P02461 1466 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms