RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ZCCHC12Q6PEW1 402 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 ENPP6Q6UWR7 440 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 FAM217AQ8IXS0 508 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 POGLUT1Q8NBL1 392 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 GPR152Q8TDT2 470 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 RIT1Q92963 219 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 SLC35G5Q96KT7 338 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 AIF1LQ9BQI0 150 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 GPR83Q9NYM4 423 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 STUB1Q9UNE7 303 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 PLEKHA6Q9Y2H5 1048 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 F5H0A9 414 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 J3QLW9 94 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 ZNF19P17023 458 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 S100GP29377 79 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 ADCYAP1R1P41586 468 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 SPHARQ15513 63 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 PRPF38BQ5VTL8 546 aaKnown RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 GDPD1Q8N9F7 314 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 ZMIZ2Q8NF64 920 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 OR2L5Q8NG80 312 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 FCRL3Q96P31 734 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 NTPCRQ9BSD7 190 aaKnown RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 MOCS1Q9NZB8 636 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 INTS6Q9UL03 887 aaKnown RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 PTGDR2Q9Y5Y4 395 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 ANKRD34BA5PLL1 514 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 GTPBP1O00178 669 aaKnown RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 KMOO15229 486 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 PCDH7O60245 1069 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 MITFO75030 526 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 PAHP00439 452 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 CELP19835 753 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 PCSK6P29122 969 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 CDK6Q00534 326 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 GRM2Q14416 872 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 C6orf136Q5SQH8 315 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 SHQ1Q6PI26 577 aaKnown RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 TSPAN33Q86UF1 283 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 ITIH5Q86UX2 942 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 IQCHQ86VS3 1027 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 RANBP3LQ86VV4 465 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 OR2L2Q8NH16 312 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 ACTR6Q9GZN1 396 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 BTBD1Q9H0C5 482 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 METTL8Q9H825 291 aaKnown RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 FBXL3Q9UKT7 428 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 ZFR2Q9UPR6 939 aaKnown RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 PCDHGA11Q9Y5H2 935 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 EEDO75530 441 aaKnown RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 BTN1A1Q13410 526 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 TAF1AQ15573 450 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 ZNF648Q5T619 568 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 GOLGA7Q7Z5G4 137 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 TCEAL3Q969E4 200 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 EXOSC1Q9Y3B2 195 aaKnown RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 CNTNAP1P78357 1384 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 LYRM1O43325 122 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 URODP06132 367 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 EDNRAP25101 427 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 YBEYP58557 167 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 S100A10P60903 97 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 DSG2Q14126 1118 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 EIF2S3LQ2VIR3 472 aaKnown RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 TCEAL5Q5H9L2 206 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 CHADLQ6NUI6 762 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 CEP97Q8IW35 865 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 PSD4Q8NDX1 1056 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 OR6K6Q8NGW6 343 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 LMO3Q8TAP4 145 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 FRS2Q8WU20 508 aa11.76□□□□□ -0.53
COL12A1-202ENST00000345356 GPN2Q9H9Y4 310 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.76□□□□□ -0.53
COL12A1-202ENST00000345356 ATRNL1Q5VV63 1379 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 TLL1O43897 1013 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 SCN2BO60939 215 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 SPATA31D3P0C874 917 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 DACT2Q5SW24 774 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 SPATA31D4Q6ZUB0 917 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 OR2T35Q8NGX2 323 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 CLIP3Q96DZ5 547 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 HERPUD2Q9BSE4 406 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 FAM124BQ9H5Z6 455 aaPredicted RBP11.75□□□□□ -0.53
COL12A1-202ENST00000345356 UGT2A1Q9Y4X1 527 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 DIP2CQ9Y2E4 1556 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 INSIG1O15503 277 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 OR1I1O60431 355 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 OR1E2P47887 323 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 AVPR1BP47901 424 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 ERVK-25P63136 954 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 AIMP2Q13155 320 aaKnown RBP11.75□□□□□ -0.53
COL12A1-202ENST00000345356 BLOC1S3Q6QNY0 202 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 PLEKHH3Q7Z736 793 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 ZNF248Q8NDW4 579 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 SETD6Q8TBK2 473 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 LPPQ93052 612 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 S100A16Q96FQ6 103 aaKnown RBP11.75□□□□□ -0.53
COL12A1-202ENST00000345356 VPS29Q9UBQ0 182 aa11.75□□□□□ -0.53
COL12A1-202ENST00000345356 ABT1Q9ULW3 272 aaKnown RBP11.75□□□□□ -0.53
COL12A1-202ENST00000345356 A0A1W2PQL4 384 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms