RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 RHNO1Q9BSD3 238 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 GABARAPL1Q9H0R8 117 aa20.65■□□□□ 0.9
CCDC38-201ENST00000344280 NFKBIL1Q9UBC1 381 aaPredicted RBP20.65■□□□□ 0.9
CCDC38-201ENST00000344280 MTCL1Q9Y4B5 1905 aaKnown RBP20.65■□□□□ 0.9
CCDC38-201ENST00000344280 C1orf226A1L170 272 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 SPINT1O43278 529 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 NOL3O60936 208 aaKnown RBP20.64■□□□□ 0.89
CCDC38-201ENST00000344280 TUBA3CQ13748 450 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 CPTPQ5TA50 214 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 CBLL1Q75N03 491 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 SPRED2Q7Z698 418 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 SYNPOQ8N3V7 929 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 CHTF18Q8WVB6 975 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 PAWRQ96IZ0 340 aaKnown RBP20.64■□□□□ 0.89
CCDC38-201ENST00000344280 TPD52L3Q96J77 140 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 FUNDC2Q9BWH2 189 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 CCDC90BQ9GZT6 254 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 CHST8Q9H2A9 424 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 TRIT1Q9H3H1 467 aaKnown RBP20.64■□□□□ 0.89
CCDC38-201ENST00000344280 SIRT5Q9NXA8 310 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 PDP1Q9P0J1 537 aaPredicted RBP20.64■□□□□ 0.89
CCDC38-201ENST00000344280 WARS2Q9UGM6 360 aaKnown RBP20.64■□□□□ 0.89
CCDC38-201ENST00000344280 BLOC1S6Q9UL45 172 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 KPNA3O00505 521 aaPredicted RBP20.64■□□□□ 0.89
CCDC38-201ENST00000344280 SOD1P00441 154 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 ABCB1P08183 1280 aaPredicted RBP20.64■□□□□ 0.89
CCDC38-201ENST00000344280 INHBBP09529 407 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 IDSP22304 550 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 DDX6P26196 483 aaKnown RBP eCLIP20.64■□□□□ 0.89
CCDC38-201ENST00000344280 HTR1BP28222 390 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 HOXA9P31269 272 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 MLLT10P55197 1068 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 C21orf58P58505 322 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 TMED1Q13445 227 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 AQP6Q13520 282 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 RFX4Q33E94 735 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 IQCCQ4KMZ1 466 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.64■□□□□ 0.89
CCDC38-201ENST00000344280 SLCO4C1Q6ZQN7 724 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 MUL1Q969V5 352 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 TBC1D20Q96BZ9 403 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 NRBF2Q96F24 287 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 NODALQ96S42 347 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 BRF2Q9HAW0 419 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 TBC1D14Q9P2M4 693 aa20.64■□□□□ 0.89
CCDC38-201ENST00000344280 UNC80Q8N2C7 3258 aa20.63■□□□□ 0.89
CCDC38-201ENST00000344280 GNG14A0A1W2PPG7 69 aa20.63■□□□□ 0.89
CCDC38-201ENST00000344280 EPCAMP16422 314 aa20.63■□□□□ 0.89
CCDC38-201ENST00000344280 GP2P55259 537 aaKnown RBP20.63■□□□□ 0.89
CCDC38-201ENST00000344280 ZNF33BQ06732 778 aa20.63■□□□□ 0.89
CCDC38-201ENST00000344280 ZNF658BQ4V348 819 aaPredicted RBP20.63■□□□□ 0.89
CCDC38-201ENST00000344280 ZNF385BQ569K4 471 aa20.63■□□□□ 0.89
CCDC38-201ENST00000344280 EIF3MQ7L2H7 374 aaKnown RBP20.63■□□□□ 0.89
CCDC38-201ENST00000344280 GRASPQ7Z6J2 395 aaPredicted RBP20.63■□□□□ 0.89
CCDC38-201ENST00000344280 B3GNT8Q7Z7M8 397 aa20.63■□□□□ 0.89
CCDC38-201ENST00000344280 SH3BP4Q9P0V3 963 aa20.63■□□□□ 0.89
CCDC38-201ENST00000344280 RPS6KA6Q9UK32 745 aa20.63■□□□□ 0.89
CCDC38-201ENST00000344280 NAALAD2Q9Y3Q0 740 aa20.63■□□□□ 0.89
CCDC38-201ENST00000344280 SAMHD1Q9Y3Z3 626 aaKnown RBP20.63■□□□□ 0.89
CCDC38-201ENST00000344280 IRAK3Q9Y616 596 aa20.63■□□□□ 0.89
CCDC38-201ENST00000344280 TMEM229AB2RXF0 380 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 QSOX1O00391 747 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 SAP18O00422 153 aaKnown RBP20.62■□□□□ 0.89
CCDC38-201ENST00000344280 PLK4O00444 970 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 EFCAB14O75071 495 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 MYO1DO94832 1006 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 C1orf105O95561 183 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 ANGPTL1O95841 491 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 TFPTP0C1Z6 253 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 DNAJA1P31689 397 aaKnown RBP20.62■□□□□ 0.89
CCDC38-201ENST00000344280 TBPL1P62380 186 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 HTRA4P83105 476 aaPredicted RBP20.62■□□□□ 0.89
CCDC38-201ENST00000344280 ERICH5Q6P6B1 374 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 ZNF852Q6ZMS4 543 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 SLC16A12Q6ZSM3 486 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 CFAP206Q8IYR0 622 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 DRAXINQ8NBI3 349 aaPredicted RBP20.62■□□□□ 0.89
CCDC38-201ENST00000344280 FNDC8Q8TC99 324 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 RAB2BQ8WUD1 216 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 MARK1Q9P0L2 795 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 CXXC1Q9P0U4 656 aaPredicted RBP20.62■□□□□ 0.89
CCDC38-201ENST00000344280 BAG5Q9UL15 447 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 H3BM21 787 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 CISD3P0C7P0 127 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 PCSK2P16519 638 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 EMX1Q04741 257 aaPredicted RBP20.62■□□□□ 0.89
CCDC38-201ENST00000344280 SPCS2Q15005 226 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 DHCR24Q15392 516 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 SMN1Q16637 294 aaKnown RBP20.62■□□□□ 0.89
CCDC38-201ENST00000344280 HORMAD1Q86X24 394 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 SYTL1Q8IYJ3 562 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 NAGSQ8N159 534 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 OR4K1Q8NGD4 311 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 ZFP90Q8TF47 636 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 UBE2FQ969M7 185 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 DKK3Q9UBP4 350 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 PSME2Q9UL46 239 aa20.62■□□□□ 0.89
CCDC38-201ENST00000344280 GCM2O75603 506 aaPredicted RBP20.61■□□□□ 0.89
CCDC38-201ENST00000344280 HLA-EP13747 358 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 HSD3B1P14060 373 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms