RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 GSTA5Q7RTV2 222 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 SLC9B2Q86UD5 537 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 STK40Q8N2I9 435 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 CADM2Q8N3J6 435 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 ARL6IP6Q8N6S5 226 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 HIPK4Q8NE63 616 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 OR6F1Q8NGZ6 308 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 RAB2BQ8WUD1 216 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 PIK3R3Q92569 461 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 DLG3Q92796 817 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 BTBD6Q96KE9 485 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 CCDC3Q9BQI4 270 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 TMEM121Q9BTD3 319 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 DTLQ9NZJ0 730 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 SLC17A7Q9P2U7 560 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 ZC3H7BQ9UGR2 993 aaKnown RBP7.08□□□□□ -1.28
ZNF540-202ENST00000343599 ZNF221Q9UK13 617 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 NXT1Q9UKK6 140 aaKnown RBP7.08□□□□□ -1.28
ZNF540-202ENST00000343599 REV3LO60673 3130 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 TISP43B9A030 160 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 B9A039 149 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 MKRN2OSH3BPM6 223 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 CACNB4O00305 520 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 TOR1AO14656 332 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 MDM4O15151 490 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 SLC28A2O43868 658 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 MLYCDO95822 493 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 TOP3BO95985 862 aaKnown RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 PROCP04070 461 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 KCNJ1P48048 391 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 ACY1Q03154 408 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 RPA4Q13156 261 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 RSBN1Q5VWQ0 802 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 TECPR1Q7Z6L1 1165 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 GRK7Q8WTQ7 553 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 SLC44A1Q8WWI5 657 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 CCDC124Q96CT7 223 aaKnown RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 C9orf72Q96LT7 481 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 MAGEB10Q96LZ2 347 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 ZNF285Q96NJ3 590 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 CAMK1GQ96NX5 476 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 TWNKQ96RR1 684 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 ZSCAN5AQ9BUG6 496 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 RAD21L1Q9H4I0 556 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 COPS7BQ9H9Q2 264 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 PHPT1Q9NRX4 125 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 IPO11Q9UI26 975 aaKnown RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 VPS28Q9UK41 221 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 HS3ST4Q9Y661 456 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 TRAV6A0A075B6T7 132 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 TRPC5OSA6NMA1 111 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 FAM171A2A8MVW0 826 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 DUX1O43812 170 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 STSP08842 583 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 JUNBP17275 347 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 ALDH18A1P54886 795 aaKnown RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 HSD17B7P56937 341 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 TUBB3Q13509 450 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 ATAD3CQ5T2N8 411 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 FCRLBQ6BAA4 426 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 PLXDC1Q8IUK5 500 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 TMEM35BQ8NCS4 154 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 CXorf40AQ8TE69 158 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 MARC2Q969Z3 335 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 DMRTB1Q96MA1 342 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 MGME1Q9BQP7 344 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 ACOXLQ9NUZ1 547 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 LHX3Q9UBR4 397 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 ALG6Q9Y672 507 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 PI4KAP42356 2102 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 C16orf96A6NNT2 1141 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 YJEFN3A6XGL0 299 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 QSOX1O00391 747 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 SPOPO43791 374 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 DEAF1O75398 565 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 CCNKO75909 580 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 SEC14L2O76054 403 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 KCNK2O95069 426 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 EPOP01588 193 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 RHOCP08134 193 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 HOXD4P09016 255 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 UCHL3P15374 230 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 NR2F2P24468 414 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 RGS7P49802 495 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 SGCGQ13326 291 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 NAB1Q13506 487 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 NHSL2Q5HYW2 709 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 METTL11BQ5VVY1 283 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 ZBTB46Q86UZ6 589 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 GALNT12Q8IXK2 581 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 SLC35F3Q8IY50 421 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 OR56A4Q8NGH8 313 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 TFAP2CQ92754 450 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 DACT3Q96B18 629 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 PWWP2AQ96N64 755 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 RBM14Q96PK6 669 aaKnown RBP7.07□□□□□ -1.28
ZNF540-202ENST00000343599 CCM2Q9BSQ5 444 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 CRB3Q9BUF7 120 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 CHST11Q9NPF2 352 aa7.07□□□□□ -1.28
ZNF540-202ENST00000343599 SLC39A1Q9NY26 324 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms