RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 CLPXO76031 633 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 NIPAL1Q6NVV3 410 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 INO80EQ8NBZ0 244 aaPredicted RBP14.8□□□□□ -0.04
COL11A2-201ENST00000341947 KLHDC7BQ96G42 594 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 PLAGL1Q9UM63 463 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 FAM221BA6H8Z2 402 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 SIX3O95343 332 aaPredicted RBP14.8□□□□□ -0.04
COL11A2-201ENST00000341947 SCGB1D2O95969 90 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 RNF220Q5VTB9 566 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 ZNF227Q86WZ6 799 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 TLCD1Q96CP7 247 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 TM9SF2Q99805 663 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 SLC6A15Q9H2J7 730 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 TRIM36Q9NQ86 728 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 SLC17A6Q9P2U8 582 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 PLEKHA6Q9Y2H5 1048 aa14.8□□□□□ -0.04
COL11A2-201ENST00000341947 LEFTY2O00292 366 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 ADAMTS3O15072 1205 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 AOC2O75106 756 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 TMEM63AO94886 807 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 HAPLN1P10915 354 aaPredicted RBP14.79□□□□□ -0.04
COL11A2-201ENST00000341947 MATN1P21941 496 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 CCINQ13939 588 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 SEMA3AQ14563 771 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 CYP1B1Q16678 543 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 SCGB2B2Q4G0G5 96 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 DCUN1D3Q8IWE4 304 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 NR4A3Q92570 626 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 CMKLR1Q99788 373 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 ADGRB2O60241 1585 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 ANKRD66B4E2M5 251 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 SLC11A1P49279 550 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 ARF3P61204 181 aaPredicted RBP14.79□□□□□ -0.04
COL11A2-201ENST00000341947 ARF1P84077 181 aaKnown RBP14.79□□□□□ -0.04
COL11A2-201ENST00000341947 CDK6Q00534 326 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 ALG10Q5BKT4 473 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 OR4C15Q8NGM1 316 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 KCNH6Q9H252 994 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 MAU2Q9Y6X3 613 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 SHOX2O60902 331 aaPredicted RBP14.79□□□□□ -0.04
COL11A2-201ENST00000341947 SYNGR4O95473 234 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 RAB36O95755 333 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 CCNOP22674 350 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 SELENOVP59797 346 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 MAD2L1BPQ15013 274 aaPredicted RBP14.79□□□□□ -0.04
COL11A2-201ENST00000341947 CEACAM20Q6UY09 585 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 NAT8LQ8N9F0 302 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 CGREF1Q99674 301 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 COQ4Q9Y3A0 265 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 ACOX3O15254 700 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 CD36P16671 472 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 DUSP3P51452 185 aaPredicted RBP14.79□□□□□ -0.04
COL11A2-201ENST00000341947 TMEM110Q86TL2 294 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 LRRC46Q96FV0 321 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 SIX2Q9NPC8 291 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 PCDHB16Q9NRJ7 776 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 GRHL1Q9NZI5 618 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 HTR3EA5X5Y0 456 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 SLC33A1O00400 549 aaPredicted RBP14.79□□□□□ -0.04
COL11A2-201ENST00000341947 EI24O14681 340 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 ARPC2O15144 300 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 ATF6P18850 670 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 PON3Q15166 354 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 ARL9Q6T311 187 aa14.79□□□□□ -0.04
COL11A2-201ENST00000341947 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.79□□□□□ -0.044e-6■■■■□ 20.4
COL11A2-201ENST00000341947 C14orf166Q9Y224 244 aaKnown RBP14.79□□□□□ -0.04
COL11A2-201ENST00000341947 GRXCR1A8MXD5 290 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 PMM2O15305 246 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 VEGFDO43915 354 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 ZNF806P0C7X5 589 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 RAB8AP61006 207 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 SYT16Q17RD7 645 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 CYP27C1Q4G0S4 372 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 ANO7Q6IWH7 933 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 POF1BQ8WVV4 589 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 ZNF516Q92618 1163 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 TUBGCP5Q96RT8 1024 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 SALL4Q9UJQ4 1053 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 MRC1P22897 1456 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 A0A1B0GVI7 797 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 LOC730098B7Z3J9 87 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 BPNT1O95861 308 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 SLC2A2P11168 524 aaPredicted RBP14.78□□□□□ -0.04
COL11A2-201ENST00000341947 ELOCQ15369 112 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 CWF19L1Q69YN2 538 aaKnown RBP14.78□□□□□ -0.04
COL11A2-201ENST00000341947 NOXRED1Q6NXP6 359 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 TMIGD1Q6UXZ0 262 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 OR4F6Q8NGB9 312 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 OR9A1PQ8NGU1 263 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 MAPKAP1Q9BPZ7 522 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 EBF3Q9H4W6 596 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 ZSCAN5BA6NJL1 495 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 C8orf89P0DMQ9 161 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 RPS13P62277 151 aaKnown RBP14.78□□□□□ -0.04
COL11A2-201ENST00000341947 MERTKQ12866 999 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 ITPRIPL2Q3MIP1 535 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 MS4A13Q5J8X5 152 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 DCAF4L2Q8NA75 395 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 IL4I1Q96RQ9 567 aa14.78□□□□□ -0.04
COL11A2-201ENST00000341947 CD180Q99467 661 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms