RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 CSHL1Q14406 222 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 NKG7Q16617 165 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 MUM1Q2TAK8 710 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 CATSPEREQ5SY80 951 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 MROH9Q5TGP6 573 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 FRA10AC1Q70Z53 315 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 THOC6Q86W42 341 aaKnown RBP14.65□□□□□ -0.06
VAPA-201ENST00000340541 OR2Y1Q8NGV0 311 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 SLC44A1Q8WWI5 657 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 NEIL2Q969S2 332 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 RERGQ96A58 199 aaPredicted RBP14.65□□□□□ -0.06
VAPA-201ENST00000340541 KIAA1191Q96A73 305 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 TM4SF19Q96DZ7 209 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 CABS1Q96KC9 395 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 SPSB2Q99619 263 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 EGFL8Q99944 293 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 RHOXF2Q9BQY4 288 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 TMEM79Q9BSE2 394 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 SARGQ9BW04 601 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 SPNS1Q9H2V7 528 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 CTSFQ9UBX1 484 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 GPN3Q9UHW5 284 aaPredicted RBP14.65□□□□□ -0.06
VAPA-201ENST00000340541 SLC22A14Q9Y267 594 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 MRPS2Q9Y399 296 aaKnown RBP14.65□□□□□ -0.06
VAPA-201ENST00000340541 PTRH2Q9Y3E5 179 aaKnown RBP14.65□□□□□ -0.06
VAPA-201ENST00000340541 PCDHGB7Q9Y5F8 929 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 MAU2Q9Y6X3 613 aa14.65□□□□□ -0.06
VAPA-201ENST00000340541 K7EM74 188 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 TAPBPO15533 448 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 FOXS1O43638 330 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 STATHP02808 62 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 ALDOAP04075 364 aaKnown RBP14.64□□□□□ -0.07
VAPA-201ENST00000340541 CD63P08962 238 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 FAM153BP0C7A2 387 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 GGT5P36269 586 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 SLC26A3P40879 764 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 GDF5P43026 501 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 CCR8P51685 355 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 MEF2AQ02078 507 aaPredicted RBP14.64□□□□□ -0.07
VAPA-201ENST00000340541 FAM153CQ494X1 144 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 CDKL4Q5MAI5 379 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 GARNL3Q5VVW2 1013 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 CPZQ66K79 652 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 PRMT9Q6P2P2 845 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 ISCA2Q86U28 154 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 CENPLQ8N0S6 344 aaPredicted RBP14.64□□□□□ -0.07
VAPA-201ENST00000340541 SLC5A11Q8WWX8 675 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 THAP11Q96EK4 314 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 TSNARE1Q96NA8 513 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 MACROD1Q9BQ69 325 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 TRIM55Q9BYV6 548 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 TXLNGYQ9BZA5 131 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 WDR54Q9H977 334 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 ZNF304Q9HCX3 659 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 MLXIPLQ9NP71 852 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 PLAAQ9Y263 795 aa14.64□□□□□ -0.07
VAPA-201ENST00000340541 IGLV3-12A0A075B6K2 115 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 NCF1BA6NI72 391 aaPredicted RBP14.63□□□□□ -0.07
VAPA-201ENST00000340541 VSTM2BA6NLU5 285 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 NCF1CA8MVU1 366 aaPredicted RBP14.63□□□□□ -0.07
VAPA-201ENST00000340541 TXNDC9O14530 226 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 DNAJB5O75953 348 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 C2P06681 752 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 PIM1P11309 404 aaPredicted RBP14.63□□□□□ -0.07
VAPA-201ENST00000340541 NCF1P14598 390 aaPredicted RBP14.63□□□□□ -0.07
VAPA-201ENST00000340541 FOLR3P41439 243 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 IRF9Q00978 393 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 SSPNQ14714 243 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 UAP1Q16222 522 aaPredicted RBP14.63□□□□□ -0.07
VAPA-201ENST00000340541 RAPH1Q70E73 1250 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 PPP1R32Q7Z5V6 425 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 MRGPREQ86SM8 312 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 GPSM1Q86YR5 675 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 HPS6Q86YV9 775 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 AMER3Q8N944 861 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 MFSD9Q8NBP5 474 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 PDPRQ8NCN5 879 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 ZNF740Q8NDX6 193 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 UHMK1Q8TAS1 419 aaKnown RBP14.63□□□□□ -0.07
VAPA-201ENST00000340541 KCTD4Q8WVF5 259 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 MVB12AQ96EY5 273 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 PSMG3-AS1Q96PY0 264 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 ATOH8Q96SQ7 321 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 PAFAH2Q99487 392 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 ALG9Q9H6U8 611 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 SNX15Q9NRS6 342 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 ACOT9Q9Y305 439 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 RELNP78509 3460 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 NUP210LQ5VU65 1888 aa14.63□□□□□ -0.07
VAPA-201ENST00000340541 TRBC2A0A5B9 178 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 ARGFXA6NJG6 315 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 LTA4HP09960 611 aaKnown RBP14.62□□□□□ -0.07
VAPA-201ENST00000340541 TFEBP19484 476 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 NR1D1P20393 614 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 OTX2P32243 289 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 MAGEA12P43365 314 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 REEP5Q00765 189 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 CHAF1BQ13112 559 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 ATP1A4Q13733 1029 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 DSG2Q14126 1118 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms