RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 PRRT4C9JH25 899 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 KPNA5O15131 536 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 SEC14L2O76054 403 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 ETHE1O95571 254 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 FTH1P02794 183 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 CTSLP07711 333 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 GSTM1P09488 218 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 PRPS1L1P21108 318 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 GJA4P35212 333 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 RANBP1P43487 201 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 GSTM4Q03013 218 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 SKIV2LQ15477 1246 aaKnown RBP15.75■□□□□ 0.11
LITAF-201ENST00000339430 CPZQ66K79 652 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 KLHL35Q6PF15 583 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 BRAT1Q6PJG6 821 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 AGTRAPQ6RW13 159 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 WDR20Q8TBZ3 569 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 SH3KBP1Q96B97 665 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 FBXL8Q96CD0 374 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 CCDC138Q96M89 665 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 CCDC90BQ9GZT6 254 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 VPS4AQ9UN37 437 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 SAMD4AQ9UPU9 718 aaKnown RBP15.75■□□□□ 0.11
LITAF-201ENST00000339430 ORC6Q9Y5N6 252 aa15.75■□□□□ 0.11
LITAF-201ENST00000339430 EPN2O95208 641 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 CCNDBP1O95273 360 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 KCNK5O95279 499 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 LAMP1P11279 417 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 TIMP2P16035 220 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 ZNF30P17039 623 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 ISL1P61371 349 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 IL5RAQ01344 420 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 MTAPQ13126 283 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 SIM2Q14190 667 aaPredicted RBP15.74■□□□□ 0.11
LITAF-201ENST00000339430 ANKDD1AQ495B1 522 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 LIPJQ5W064 366 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 CYP4Z1Q86W10 505 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 HIPK1Q86Z02 1210 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 SFTPA1Q8IWL2 248 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 ZZZ3Q8IYH5 903 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 RASGEF1AQ8N9B8 481 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 LMNTD1Q8N9Z9 388 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 WFIKKN2Q8TEU8 576 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 HHIPQ96QV1 700 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 OR4K3Q96R72 315 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 MYOCQ99972 504 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 RIBC2Q9H4K1 309 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 PAK1IP1Q9NWT1 392 aaPredicted RBP15.74■□□□□ 0.11
LITAF-201ENST00000339430 STOX2Q9P2F5 926 aaPredicted RBP15.74■□□□□ 0.11
LITAF-201ENST00000339430 ITM2BQ9Y287 266 aa15.74■□□□□ 0.11
LITAF-201ENST00000339430 KLHL33A6NCF5 533 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 MAGEB17A8MXT2 336 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 SLC1A7O00341 560 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 BCKDKO14874 412 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 XPNPEP2O43895 674 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 SLCO2B1O94956 709 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 JUNBP17275 347 aaPredicted RBP15.73■□□□□ 0.11
LITAF-201ENST00000339430 CCNA2P20248 432 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 XPAP23025 273 aaPredicted RBP15.73■□□□□ 0.11
LITAF-201ENST00000339430 IGFBP5P24593 272 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 NNMTP40261 264 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 ACSM2AQ08AH3 577 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 NFATC3Q12968 1075 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 TSTA3Q13630 321 aaPredicted RBP15.73■□□□□ 0.11
LITAF-201ENST00000339430 RAPSNQ13702 412 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 HENMT1Q5T8I9 393 aaKnown RBP15.73■□□□□ 0.11
LITAF-201ENST00000339430 ZNF691Q5VV52 312 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 ACSM2BQ68CK6 577 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 SERPINA11Q86U17 422 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 TERB1Q8NA31 727 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 GPR156Q8NFN8 814 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 TBC1D15Q8TC07 691 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 ABTB1Q969K4 478 aaPredicted RBP15.73■□□□□ 0.11
LITAF-201ENST00000339430 TMEM159Q96B96 161 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 PLGRKTQ9HBL7 147 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 SGK2Q9HBY8 427 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 WARS2Q9UGM6 360 aaKnown RBP15.73■□□□□ 0.11
LITAF-201ENST00000339430 WASH3PC4AMC7 463 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 MAN1A2O60476 641 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 SCN2BO60939 215 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 GSTM2P28161 218 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 PDHA2P29803 388 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 OPRD1P41143 372 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 PLA2G16P53816 162 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 RAD23AP54725 363 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 GRSF1Q12849 480 aaKnown RBP eCLIP15.73■□□□□ 0.112e-12■■■□□ 17.2
LITAF-201ENST00000339430 CSTF3Q12996 717 aaKnown RBP15.73■□□□□ 0.11
LITAF-201ENST00000339430 VMACQ2NL98 169 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 DPY19L1Q2PZI1 675 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 HKDC1Q2TB90 917 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 SHQ1Q6PI26 577 aaKnown RBP15.73■□□□□ 0.11
LITAF-201ENST00000339430 FKBP9P1Q75LS8 142 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 MTSS1LQ765P7 747 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 TANKQ92844 425 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 NRBF2Q96F24 287 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 CSF3RQ99062 836 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 COL4A3Q01955 1670 aa15.73■□□□□ 0.11
LITAF-201ENST00000339430 PFDN1O60925 122 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 PSIP1O75475 530 aaKnown RBP15.72■□□□□ 0.11
LITAF-201ENST00000339430 FKBP9O95302 570 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms