RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ABATP80404 500 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 CCZ1BP86790 482 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 CCZ1P86791 482 aaPredicted RBP14.79□□□□□ -0.04
LINC01116-202ENST00000339037 PMP22Q01453 160 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 NDUFA9Q16795 377 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 ZNF630Q2M218 657 aaPredicted RBP14.79□□□□□ -0.04
LINC01116-202ENST00000339037 MINDY4Q4G0A6 757 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 C4orf22Q6V702 233 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 PLD3Q8IV08 490 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 LRRC8AQ8IWT6 810 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 CPAMD8Q8IZJ3 1885 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 PPFIBP2Q8ND30 876 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 ZNF480Q8WV37 535 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 EBNA1BP2Q99848 306 aaKnown RBP14.79□□□□□ -0.04
LINC01116-202ENST00000339037 VN1R1Q9GZP7 353 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 ABCF3Q9NUQ8 709 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 GALPQ9UBC7 116 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 ZKSCAN5Q9Y2L8 839 aa14.79□□□□□ -0.04
LINC01116-202ENST00000339037 E7ENX8 843 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 H0YIG0 161 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 CYC1P08574 325 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 COX6B1P14854 86 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 OGNP20774 298 aaKnown RBP14.78□□□□□ -0.04
LINC01116-202ENST00000339037 TAP2Q03519 686 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 KCNJ11Q14654 390 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 BTBD16Q32M84 506 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 TTLL9Q3SXZ7 439 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 ZNF766Q5HY98 468 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 THEMIS2Q5TEJ8 643 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 MFSD4BQ5TF39 518 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 PLAG1Q6DJT9 500 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 KIAA0930Q6ICG6 404 aaPredicted RBP14.78□□□□□ -0.04
LINC01116-202ENST00000339037 GSTA5Q7RTV2 222 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 REXO1L1PQ8IX06 675 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 AMER2Q8N7J2 671 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 TRIM58Q8NG06 486 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 OR9A4Q8NGU2 314 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 KCTD12Q96CX2 325 aaKnown RBP14.78□□□□□ -0.04
LINC01116-202ENST00000339037 C19orf25Q9UFG5 118 aaPredicted RBP14.78□□□□□ -0.04
LINC01116-202ENST00000339037 SOX13Q9UN79 622 aa14.78□□□□□ -0.04
LINC01116-202ENST00000339037 IGHV3-20A0A0C4DH32 117 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 TCRBV7S3A2A0A539 114 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 CEP104O60308 925 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 SYF2O95926 243 aaKnown RBP14.77□□□□□ -0.05
LINC01116-202ENST00000339037 SNRPB2P08579 225 aaKnown RBP14.77□□□□□ -0.05
LINC01116-202ENST00000339037 PAMP19021 973 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 CLCN7P51798 805 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 TERF1P54274 439 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 CDK16Q00536 496 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 ACER2Q5QJU3 275 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 XKRXQ6PP77 449 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 LANCL3Q6ZV70 420 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 CENPUQ71F23 418 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 CPEB2Q7Z5Q1 589 aaKnown RBP14.77□□□□□ -0.05
LINC01116-202ENST00000339037 CILP2Q8IUL8 1156 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 FBXO15Q8NCQ5 510 aaPredicted RBP14.77□□□□□ -0.05
LINC01116-202ENST00000339037 MAGED4Q96JG8 741 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 CYTH2Q99418 400 aa14.77□□□□□ -0.05
LINC01116-202ENST00000339037 H7BY64 318 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 NSA2O95478 260 aaKnown RBP14.76□□□□□ -0.05
LINC01116-202ENST00000339037 STATHP02808 62 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 ESRRAP11474 423 aaPredicted RBP14.76□□□□□ -0.05
LINC01116-202ENST00000339037 TPSB2P20231 275 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 SNRPNP63162 240 aaKnown RBP14.76□□□□□ -0.05
LINC01116-202ENST00000339037 CUL1Q13616 776 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 PTK6Q13882 451 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 TRIP13Q15645 432 aaPredicted RBP14.76□□□□□ -0.05
LINC01116-202ENST00000339037 TPSAB1Q15661 275 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 FCRLBQ6BAA4 426 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 ZNF470Q6ECI4 717 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 NEPROQ6NW34 567 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 CASC4Q6P4E1 433 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 BRICD5Q6PL45 260 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 BEST3Q8N1M1 668 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 PRELID2Q8N945 189 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 GIMAP7Q8NHV1 300 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 MCOLN3Q8TDD5 553 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 MAIP1Q8WWC4 291 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 ASB11Q8WXH4 323 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 THAP11Q96EK4 314 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 LURAP1Q96LR2 239 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 ZNF354BQ96LW1 612 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 PRAP1Q96NZ9 151 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 SLC30A3Q99726 388 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 INTS10Q9NVR2 710 aaKnown RBP14.76□□□□□ -0.05
LINC01116-202ENST00000339037 TINAGQ9UJW2 476 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 PPP2R2CQ9Y2T4 447 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 PCDHGB6Q9Y5F9 930 aa14.76□□□□□ -0.05
LINC01116-202ENST00000339037 FAM227AF5H4B4 570 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 TTI1O43156 1089 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 MLYCDO95822 493 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 ENO3P13929 434 aaPredicted RBP14.75□□□□□ -0.05
LINC01116-202ENST00000339037 XCR1P46094 333 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 VPS41P49754 854 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 SMSP52788 366 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 RIPPLY3P57055 190 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 RPS15AP62244 130 aaKnown RBP14.75□□□□□ -0.05
LINC01116-202ENST00000339037 TUBA3CQ13748 450 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 C3AR1Q16581 482 aa14.75□□□□□ -0.05
LINC01116-202ENST00000339037 TUBA3EQ6PEY2 450 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms