RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SLC13A3Q8WWT9 602 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 FGF11Q92914 225 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 TLCD1Q96CP7 247 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 CLIP3Q96DZ5 547 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 L3HYPDHQ96EM0 354 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 SEC16BQ96JE7 1060 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 ZNF285Q96NJ3 590 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 ULBP3Q9BZM4 244 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 OCEL1Q9H607 264 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 ACTR5Q9H9F9 607 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 SEMA4BQ9NPR2 832 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 ASCL3Q9NQ33 180 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 GEMIN8Q9NWZ8 242 aaKnown RBP11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 SLC17A7Q9P2U7 560 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 DKK4Q9UBT3 224 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 PCTPQ9UKL6 214 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 SRPK3Q9UPE1 567 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 PCDHB3Q9Y5E6 796 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 HYKKA2RU49 373 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 ZSCAN9O15535 394 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 ZNF749O43361 778 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 ATP8B1O43520 1251 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 HCRTR1O43613 425 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 CPNE3O75131 537 aaKnown RBP11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 STK17BO94768 372 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 KIAA0754O94854 1291 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 NTRK1P04629 796 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 SERPIND1P05546 499 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 KLK3P07288 261 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 NEFHP12036 1026 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 EPORP19235 508 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 ALAS2P22557 587 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 GSTM2P28161 218 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 BCL6P41182 706 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 SCTRP47872 440 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 SLC18A1P54219 525 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 NAGLUP54802 743 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 EMP3P54852 163 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 CDH13P55290 713 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 PWP1Q13610 501 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 NDUFA9Q16795 377 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 HHATQ5VTY9 493 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 LIPMQ5VYY2 423 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 MED27Q6P2C8 311 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 C6orf15Q6UXA7 325 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 NUDCD3Q8IVD9 361 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 C10orf107Q8IVU9 208 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 ZNF740Q8NDX6 193 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 TRPC4APQ8TEL6 797 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 GATA6Q92908 595 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 ARL8AQ96BM9 186 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 REPS1Q96D71 796 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 ATP6V1G3Q96LB4 118 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 NTMT1Q9BV86 223 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 ENAMQ9NRM1 1142 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 STARD5Q9NSY2 213 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 TXLNGQ9NUQ3 528 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 NKIRAS1Q9NYS0 192 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 FOXJ2Q9P0K8 574 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 ADGRE2Q9UHX3 823 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 ZFP69BQ9UJL9 534 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 ACSL6Q9UKU0 697 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 PADI1Q9ULC6 663 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 TMEM184BQ9Y519 407 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 PCDHGA4Q9Y5G9 962 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 PCDHGA11Q9Y5H2 935 aa11.38□□□□□ -0.59
SPTLC1-202ENST00000337841 SPTBN2O15020 2390 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 FITM1A5D6W6 292 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 URADA6NGE7 173 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 HMGB1P1B2RPK0 211 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 STMND1H3BQB6 276 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 H3BQF6 201 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 OR7A17O14581 309 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 BIRC5O15392 142 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 NRP2O60462 931 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 BPGMP07738 259 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 SLC35G6P0C7Q6 338 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 PIM1P11309 404 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 AGXTP21549 392 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 SERPINB1P30740 379 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 ALDH3A1P30838 453 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 HPDP32754 393 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 RGS1Q08116 209 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 E2F2Q14209 437 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 MAP7Q14244 749 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 MUM1Q2TAK8 710 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 PRTGQ2VWP7 1150 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 GARNL3Q5VVW2 1013 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 TTC19Q6DKK2 380 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 GRHL2Q6ISB3 625 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 ZFAND4Q86XD8 727 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 HOMEZQ8IX15 550 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 ESX1Q8N693 406 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 ANKRD42Q8N9B4 389 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 L3MBTL4Q8NA19 623 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 PPP1R14CQ8TAE6 165 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 MDM1Q8TC05 714 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 PMEPA1Q969W9 287 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 TM4SF19Q96DZ7 209 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 CNDP1Q96KN2 507 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms