RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CRHR2Q13324 411 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 ZNF598Q86UK7 904 aaKnown RBP13.34□□□□□ -0.27
RTN4-202ENST00000337526 FBXO27Q8NI29 283 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 SMPDL3AQ92484 453 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 CNDP2Q96KP4 475 aaKnown RBP13.34□□□□□ -0.27
RTN4-202ENST00000337526 GAL3ST1Q99999 423 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 TNFRSF10DQ9UBN6 386 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 RBM7Q9Y580 266 aaKnown RBP13.34□□□□□ -0.27
RTN4-202ENST00000337526 DNAJC15Q9Y5T4 150 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 CFAP20Q9Y6A4 193 aaKnown RBP13.34□□□□□ -0.27
RTN4-202ENST00000337526 DHRS4L1P0CG22 281 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 SCAPQ12770 1279 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 GRIK2Q13002 908 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 GPR68Q15743 365 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 Q6ZVL8 140 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 LINGO2Q7L985 606 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 GPRIN1Q7Z2K8 1008 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 MAPK15Q8TD08 544 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 CYB5D2Q8WUJ1 264 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 ELAC1Q9H777 363 aaKnown RBP13.34□□□□□ -0.27
RTN4-202ENST00000337526 AIG1Q9NVV5 245 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 TBC1D24Q9ULP9 559 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 DLGAP4Q9Y2H0 992 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 A0A075B6Q4 140 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 IGKV6-21A0A0C4DH24 114 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 OR6C70A6NIJ9 312 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 TMEM88BA6NKF7 163 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 CDRT1O95170 752 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 RASAL1O95294 804 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 C7P10643 843 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 VIPR1P32241 457 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 ACTR1BP42025 376 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 DNASE1L1P49184 302 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 SLC11A1P49279 550 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 ACTR1AP61163 376 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 PCBP2Q15366 365 aaKnown RBP eCLIP13.34□□□□□ -0.279e-21■■□□□ 12.6
RTN4-202ENST00000337526 ANKRD26P1Q6NSI1 321 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 NOXRED1Q6NXP6 359 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 BLOC1S3Q6QNY0 202 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 ARL9Q6T311 187 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 KBTBD6Q86V97 674 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 LINC00471Q8N535 108 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 IL12RB2Q99665 862 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 BARD1Q99728 777 aaKnown RBP13.34□□□□□ -0.27
RTN4-202ENST00000337526 COMMD4Q9H0A8 199 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 KCNH6Q9H252 994 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 ADAMTS10Q9H324 1103 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 FARSBQ9NSD9 589 aaKnown RBP13.34□□□□□ -0.27
RTN4-202ENST00000337526 B4GALT6Q9UBX8 382 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 MYH7P12883 1935 aa13.34□□□□□ -0.27
RTN4-202ENST00000337526 LDB2O43679 373 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 CH25HO95992 272 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 HLA-DPB1P04440 258 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 AKT2P31751 481 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 RFC2P35250 354 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 GJA8P48165 433 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 ARSDP51689 593 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 ZNF423Q2M1K9 1284 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 PRPF38BQ5VTL8 546 aaKnown RBP13.33□□□□□ -0.27
RTN4-202ENST00000337526 ATG9BQ674R7 924 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 ZNF613Q6PF04 617 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 ZNF517Q6ZMY9 492 aaPredicted RBP13.33□□□□□ -0.27
RTN4-202ENST00000337526 NPWQ8N729 165 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 TMEM145Q8NBT3 493 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 GAL3ST4Q96RP7 486 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 SLC30A2Q9BRI3 323 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 WDR26Q9H7D7 661 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 ZNF696Q9H7X3 374 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 NEUROD4Q9HD90 331 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 PCDHB3Q9Y5E6 796 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 PCDHGB7Q9Y5F8 929 aa13.33□□□□□ -0.27
RTN4-202ENST00000337526 A0A1W2PQ72 361 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 LDOC1O95751 146 aaPredicted RBP13.33□□□□□ -0.28
RTN4-202ENST00000337526 SERPINA3P01011 423 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 PHC1P78364 1004 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 PITPNAQ00169 270 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 NFATC2Q13469 925 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 UPP1Q16831 310 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 PIGGQ5H8A4 983 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 TCEAL5Q5H9L2 206 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 SLC8B1Q6J4K2 584 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 PRR23CQ6ZRP0 262 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 MMAAQ8IVH4 418 aaKnown RBP13.33□□□□□ -0.28
RTN4-202ENST00000337526 ATP6V1C2Q8NEY4 427 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 C1orf216Q8TAB5 229 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 MND1Q9BWT6 205 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 EHD1Q9H4M9 534 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 PDLIM7Q9NR12 457 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 MARK1Q9P0L2 795 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 IL36AQ9UHA7 158 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 GRIP1Q9Y3R0 1128 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 C6orf47O95873 294 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 GKP32189 559 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 OR1E2P47887 323 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 NIPAL1Q6NVV3 410 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 HDDC3Q8N4P3 179 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 SUN5Q8TC36 379 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 AASSQ9UDR5 926 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 CDH7Q9ULB5 785 aa13.33□□□□□ -0.28
RTN4-202ENST00000337526 ZCWPW2A0A1B0GU75 182 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms