RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TNFAIP8L2Q6P589 184 aaPredicted RBP12.86□□□□□ -0.35
COL2A1-201ENST00000337299 GOLGA7Q7Z5G4 137 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 ZSWIM9Q86XI8 627 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 BRSK1Q8TDC3 778 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 PPCDCQ96CD2 204 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 COQ8BQ96D53 544 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 EXTL2Q9UBQ6 330 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 LOC102723532A0A0G2JNH3 316 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 A0A1B0GVC2 190 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 MANSC4A6NHS7 340 aaPredicted RBP12.86□□□□□ -0.35
COL2A1-201ENST00000337299 A6NIN4 97 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 ANXA3P12429 323 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 MAD2L1BPQ15013 274 aaPredicted RBP12.86□□□□□ -0.35
COL2A1-201ENST00000337299 SIGIRRQ6IA17 410 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 TOMM5Q8N4H5 51 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 TSPEARQ8WU66 669 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 HYLS1Q96M11 299 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 TEPSINQ96N21 525 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 ADAM2Q99965 735 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 FUZQ9BT04 418 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 TTLL2Q9BWV7 592 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 KLHL28Q9NXS3 571 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 SEC14L4Q9UDX3 406 aa12.86□□□□□ -0.35
COL2A1-201ENST00000337299 A0A1W2PQH9 124 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 TTC34A8MYJ7 566 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 OR56A5P0C7T3 313 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 SMIM10L2AP0DMW4 78 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 SMIM10L2BP0DMW5 78 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 PRKCAP17252 672 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 ARNTP27540 789 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 KDELR2P33947 212 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 ADARB1P78563 741 aaKnown RBP12.85□□□□□ -0.35
COL2A1-201ENST00000337299 CTXN3Q4LDR2 81 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 ZNF598Q86UK7 904 aaKnown RBP12.85□□□□□ -0.35
COL2A1-201ENST00000337299 SIMC1Q8NDZ2 872 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 ATP6V1C2Q8NEY4 427 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 GAL3ST1Q99999 423 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 GON7Q9BXV9 100 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 EDARQ9UNE0 448 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 MAP1BP46821 2468 aaKnown RBP12.85□□□□□ -0.35
COL2A1-201ENST00000337299 TIAM2Q8IVF5 1701 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 MPZL2O60487 215 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 GRK4P32298 578 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 XKP51811 444 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 CBLBQ13191 982 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 ABRAXAS2Q15018 415 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 C18orf21Q32NC0 220 aaPredicted RBP12.85□□□□□ -0.35
COL2A1-201ENST00000337299 CCDC157Q569K6 752 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 PLPPR4Q7Z2D5 763 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 TAF8Q7Z7C8 310 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 C10orf53Q8N6V4 93 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 OR8J3Q8NGG0 315 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 SCRN2Q96FV2 425 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 TEFMQ96QE5 360 aaKnown RBP12.85□□□□□ -0.35
COL2A1-201ENST00000337299 TRPM5Q9NZQ8 1165 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 URB1O60287 2271 aaKnown RBP12.85□□□□□ -0.35
COL2A1-201ENST00000337299 PQBP1O60828 265 aaKnown RBP12.85□□□□□ -0.35
COL2A1-201ENST00000337299 CELP19835 753 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 LCN1P31025 176 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 NOVP48745 357 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 CTU2Q2VPK5 515 aaKnown RBP12.85□□□□□ -0.35
COL2A1-201ENST00000337299 HSD17B12Q53GQ0 312 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 ZNF691Q5VV52 312 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 DUSP26Q9BV47 211 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 DPAGT1Q9H3H5 408 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 TPT1P8Q9HAU6 139 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 CUEDC1Q9NWM3 386 aaPredicted RBP12.85□□□□□ -0.35
COL2A1-201ENST00000337299 CORO2BQ9UQ03 480 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 ZNF142P52746 1687 aaPredicted RBP12.85□□□□□ -0.35
COL2A1-201ENST00000337299 EEF1E1O43324 174 aaKnown RBP12.85□□□□□ -0.35
COL2A1-201ENST00000337299 EFCAB14O75071 495 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 SLC10A3P09131 477 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 PRPS2P11908 318 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 PPIBP23284 216 aaKnown RBP12.85□□□□□ -0.35
COL2A1-201ENST00000337299 LIPAP38571 399 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 ARF5P84085 180 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 SLAMF1Q13291 335 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 HEPACAMQ14CZ8 416 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 ZBTB6Q15916 424 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 BRMS1LQ5PSV4 323 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 ATAT1Q5SQI0 421 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 ANKS3Q6ZW76 656 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 ZNF599Q96NL3 588 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 RHNO1Q9BSD3 238 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 MAU2Q9Y6X3 613 aa12.85□□□□□ -0.35
COL2A1-201ENST00000337299 PRRG1O14668 218 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 BEST1O76090 585 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 CLDN10P78369 228 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 ADAM15Q13444 863 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 RCAN2Q14206 197 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 LINGO2Q7L985 606 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 TRMT11Q7Z4G4 463 aaKnown RBP12.84□□□□□ -0.35
COL2A1-201ENST00000337299 CLEC14AQ86T13 490 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 C12orf42Q96LP6 360 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 NFKBIZQ9BYH8 718 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 SGK2Q9HBY8 427 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 QPCTLQ9NXS2 382 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 PCDHB5Q9Y5E4 795 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 RAI2Q9Y5P3 530 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 POM121CA8CG34 1229 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms