RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 OR2A5Q96R48 311 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 ZFYVE21Q9BQ24 234 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 RTKNQ9BST9 563 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 SLC29A3Q9BZD2 475 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 SYNPO2LQ9H987 977 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 PNPOQ9NVS9 261 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 PCDHGA4Q9Y5G9 962 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 AGRPO00253 132 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 HCRTR1O43613 425 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 KRT6AP02538 564 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 KRT6BP04259 564 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 PCNAP12004 261 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 CCKBRP32239 447 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 KRT6CP48668 564 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 NEK2P51955 445 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 IFT88Q13099 833 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 C16orf72Q14CZ0 275 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 DEFB110Q30KQ9 67 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 GLIPR1L2Q4G1C9 344 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 SGO1Q5FBB7 561 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 ZC3H12BQ5HYM0 836 aaKnown RBP13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 TMTC4Q5T4D3 741 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 HES3Q5TGS1 186 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 KANK2Q63ZY3 851 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 FRG2Q64ET8 278 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 ADNP2Q6IQ32 1131 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 CRLF3Q8IUI8 442 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 MCATQ8IVS2 390 aaKnown RBP13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 MFSD9Q8NBP5 474 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 REPS1Q96D71 796 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 MTFMTQ96DP5 389 aaKnown RBP13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 FRG2BQ96QU4 278 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 ELOVL6Q9H5J4 265 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 SNX6Q9UNH7 406 aa13.13□□□□□ -0.31
TUBA1B-202ENST00000336023 HEATR5BQ9P2D3 2071 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 LOC105369274A0A096LPK9 316 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 LOC102723532A0A0G2JNH3 316 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 DCDC2BA2VCK2 349 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 TMX2-CTNND1H3BSU7 103 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 MANBAO00462 879 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 ULK1O75385 1050 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 VIMP08670 466 aaKnown RBP13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 FOLR1P15328 257 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 CSTF2P33240 577 aaKnown RBP eCLIP13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 AHRP35869 848 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 PLA2G5P39877 138 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 CYP4F2P78329 520 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 DDX39BQ13838 428 aaKnown RBP13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 ISXQ2M1V0 245 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 UGT3A2Q3SY77 523 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 FRMPD2BQ6IN97 320 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 VN1R5Q7Z5H4 357 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 MTERF4Q7Z6M4 381 aaKnown RBP13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 KIRREL3Q8IZU9 778 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 OR4N4Q8N0Y3 316 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 AGBL5Q8NDL9 886 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 TTLQ8NG68 377 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 HUS1BQ8NHY5 278 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 WDR20Q8TBZ3 569 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 THAP11Q96EK4 314 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 MTERF1Q99551 399 aaKnown RBP13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 RHBGQ9H310 441 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 PRM3Q9NNZ6 103 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 FARSBQ9NSD9 589 aaKnown RBP13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 MARCOQ9UEW3 520 aaPredicted RBP13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 ZFP69BQ9UJL9 534 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 PLCL2Q9UPR0 1127 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 CLCA2Q9UQC9 943 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 TSC22D4Q9Y3Q8 395 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 DNAJC15Q9Y5T4 150 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 AP1M2Q9Y6Q5 423 aa13.12□□□□□ -0.31
TUBA1B-202ENST00000336023 ANKDD1BA6NHY2 528 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 H0YGG7 62 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 EDF1O60869 148 aaKnown RBP13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 CSO75390 466 aaKnown RBP13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 KITP10721 976 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 LSP1P33241 339 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 GABRA4P48169 554 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 HTR6P50406 440 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 VSX2P58304 361 aaPredicted RBP13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 ARF3P61204 181 aaPredicted RBP13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 GNGT1P63211 74 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 C10orf62Q5T681 223 aaPredicted RBP13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 SCIMPQ6UWF3 145 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 VN1R4Q7Z5H5 301 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 RNF175Q8N4F7 328 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 CHCHD4Q8N4Q1 142 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 PIWIL2Q8TC59 973 aaKnown RBP13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 ZNF473Q8WTR7 871 aaKnown RBP13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 SELENOMQ8WWX9 145 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 N4BP2L2Q92802 583 aaPredicted RBP13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 USP7Q93009 1102 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 RERGQ96A58 199 aaPredicted RBP13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 SEC16BQ96JE7 1060 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 ZNF317Q96PQ6 595 aaPredicted RBP13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 DEPDC7Q96QD5 511 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 HBEGFQ99075 208 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 STRADBQ9C0K7 418 aa13.11□□□□□ -0.31
TUBA1B-202ENST00000336023 SPTBN2O15020 2390 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms