RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 SH3BP4Q9P0V3 963 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 PSME2Q9UL46 239 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 FZD4Q9ULV1 537 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 KCNE2Q9Y6J6 123 aa17.09■□□□□ 0.33
LRCH3-201ENST00000334859 TRIM43BA6NCK2 446 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 H3BM21 787 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 UGT2B11O75310 529 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 FGF19O95750 216 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 FPR1P21462 350 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 NR4A1P22736 598 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 EPHA5P54756 1037 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 RPS13P62277 151 aaKnown RBP17.08■□□□□ 0.33
LRCH3-201ENST00000334859 GAB1Q13480 694 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 EIF3MQ7L2H7 374 aaKnown RBP17.08■□□□□ 0.33
LRCH3-201ENST00000334859 GPR155Q7Z3F1 870 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 NPAS3Q8IXF0 933 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 PGBD3Q8N328 593 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 ATG16L2Q8NAA4 619 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 OR56A3Q8NH54 315 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 TANKQ92844 425 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 MAL2Q969L2 176 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 TRIM43Q96BQ3 446 aaPredicted RBP17.08■□□□□ 0.33
LRCH3-201ENST00000334859 C11orf24Q96F05 449 aaPredicted RBP17.08■□□□□ 0.33
LRCH3-201ENST00000334859 ZSWIM3Q96MP5 696 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 FUNDC2Q9BWH2 189 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 TRIT1Q9H3H1 467 aaKnown RBP17.08■□□□□ 0.33
LRCH3-201ENST00000334859 REEP1Q9H902 201 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 TBC1D23Q9NUY8 699 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 AASSQ9UDR5 926 aa17.08■□□□□ 0.33
LRCH3-201ENST00000334859 SH3PXD2BA1X283 911 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 MAGEB3O15480 346 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 PCDH7O60245 1069 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 MAN1A2O60476 641 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 XYLBO75191 536 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 INMTO95050 263 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 CCDC159P0C7I6 412 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 C21orf58P58505 322 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 TBPL1P62380 186 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 HTRA3P83110 453 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 LRRC26Q2I0M4 334 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 ANKDD1AQ495B1 522 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 SPIN4Q56A73 249 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 KDM4DQ6B0I6 523 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 CBLL1Q75N03 491 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 TBC1D20Q96BZ9 403 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 VPS4AQ9UN37 437 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 COQ6Q9Y2Z9 468 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 GMPPBQ9Y5P6 360 aa17.08■□□□□ 0.32
LRCH3-201ENST00000334859 SEMG1P04279 462 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.07■□□□□ 0.32
LRCH3-201ENST00000334859 MED27Q6P2C8 311 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 CRTC3Q6UUV7 619 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 B3GNT8Q7Z7M8 397 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 TRAPPC5Q8IUR0 188 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 SYNPOQ8N3V7 929 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 OR4A15Q8NGL6 344 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 BORCS5Q969J3 196 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 METTL2AQ96IZ6 378 aaKnown RBP17.07■□□□□ 0.32
LRCH3-201ENST00000334859 CSF3RQ99062 836 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 FAM83CQ9BQN1 747 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 RAD21L1Q9H4I0 556 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 GPN2Q9H9Y4 310 aaPredicted RBP17.07■□□□□ 0.32
LRCH3-201ENST00000334859 KRT84Q9NSB2 600 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 NPC1O15118 1278 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 ITIH1P19827 911 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 HTR1BP28222 390 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 TIA1P31483 386 aaKnown RBP eCLIP17.07■□□□□ 0.327e-10■■■■■ 33.1
LRCH3-201ENST00000334859 CLK3P49761 638 aaKnown RBP17.07■□□□□ 0.32
LRCH3-201ENST00000334859 ITGA1P56199 1179 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 VEZF1Q14119 521 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 STARD3Q14849 445 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 ZNF829Q3KNS6 432 aaPredicted RBP17.07■□□□□ 0.32
LRCH3-201ENST00000334859 ANXA8L1Q5VT79 327 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 CAPN13Q6MZZ7 669 aaPredicted RBP17.07■□□□□ 0.32
LRCH3-201ENST00000334859 KIAA0907Q7Z7F0 614 aaPredicted RBP17.07■□□□□ 0.32
LRCH3-201ENST00000334859 LMNTD1Q8N9Z9 388 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 TTC29Q8NA56 475 aaPredicted RBP17.07■□□□□ 0.32
LRCH3-201ENST00000334859 ZNF480Q8WV37 535 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 THUMPD1Q9NXG2 353 aaKnown RBP17.07■□□□□ 0.32
LRCH3-201ENST00000334859 DKK3Q9UBP4 350 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 BTNL2Q9UIR0 455 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 NAALAD2Q9Y3Q0 740 aa17.07■□□□□ 0.32
LRCH3-201ENST00000334859 CHD7Q9P2D1 2997 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 GBAP04062 536 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 MAPK9P45984 424 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 DGKGP49619 791 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 METAP1P53582 386 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 GP2P55259 537 aaKnown RBP17.06■□□□□ 0.32
LRCH3-201ENST00000334859 KEAP1Q14145 624 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 CATSPEREQ5SY80 951 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 SLCO4C1Q6ZQN7 724 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 CFAP206Q8IYR0 622 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 FBLIM1Q8WUP2 373 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 CHTF18Q8WVB6 975 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 LZICQ8WZA0 190 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 ZNF566Q969W8 418 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 SAMD11Q96NU1 681 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 APOL4Q9BPW4 351 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 CRISPLD2Q9H0B8 497 aa17.06■□□□□ 0.32
LRCH3-201ENST00000334859 CORO2BQ9UQ03 480 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms