RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 FNDC3BQ53EP0 1204 aaKnown RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 TMEM69Q5SWH9 247 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CDCA2Q69YH5 1023 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 MARCH9Q86YJ5 346 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 SLC22A18Q96BI1 424 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 APOLD1Q96LR9 279 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CENPOQ9BU64 300 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 DCDC2CA8MYV0 355 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 BMP2P12643 396 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 HOXB9P17482 250 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 PBX3P40426 434 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 MLLT3P42568 568 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 HSD11B2P80365 405 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 LRRC66Q68CR7 880 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 RALGPS2Q86X27 583 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 LNX2Q8N448 690 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 FAM86B1Q8N7N1 296 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 SAMD12Q8N8I0 201 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 OR52J3Q8NH60 311 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 NELL2Q99435 816 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 MYOCQ99972 504 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 TMEM185BQ9H7F4 350 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 MS4A12Q9NXJ0 267 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 LRFN1Q9P244 771 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 TEX13DA0A0J9YY54 714 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 PCK2Q16822 640 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 SLC35F1Q5T1Q4 408 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 UBAP2Q5T6F2 1119 aaKnown RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 TMEM214Q6NUQ4 689 aaKnown RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ALG3Q92685 438 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 RTFDC1Q9BY42 306 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 HMX3A6NHT5 357 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 F5H0A9 414 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 SGCEO43556 437 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CSTBP04080 98 aaKnown RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ZDHHC11BP0C7U3 371 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 PRKXP51817 358 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ARSFP54793 590 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 LASP1Q14847 261 aaKnown RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 SEMA6DQ8NFY4 1073 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 EDEM1Q92611 657 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 NTAN1Q96AB6 310 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 SEMA3CQ99985 751 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 SLC38A1Q9H2H9 487 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 IRS2Q9Y4H2 1338 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 A0A096LPI6 279 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 TREHO43280 583 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ADRB2P07550 413 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 IFNGR1P15260 489 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 NDUFS1P28331 727 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 THPOP40225 353 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 VLDLRP98155 873 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CTBP1Q13363 440 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ELOAQ14241 798 aaKnown RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 DCST2Q5T1A1 773 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 FKBP1CQ5VVH2 108 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 METAP1DQ6UB28 335 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CES3Q6UWW8 571 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CMC1Q7Z7K0 106 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CRYBG2Q8N1P7 616 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CCDC71LQ8N9Z2 235 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CSPG4P5Q96PW8 444 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 SLC19A3Q9BZV2 496 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ARL6Q9H0F7 186 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 WDR55Q9H6Y2 383 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CCM2LQ9NUG4 571 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 FZD4Q9ULV1 537 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 A0A0D9SG52 128 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 FAM159BA6NKW6 160 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 LGR5O75473 907 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 BANF1O75531 89 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 AVPR1BP47901 424 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 MARCKSL1P49006 195 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 NFATC3Q12968 1075 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 AGAP6Q5VW22 663 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 RFPL4BQ6ZWI9 263 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 METTL4Q8N3J2 472 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 AGAP4Q96P64 663 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 TMPRSS4Q9NRS4 437 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 KIF25Q9UIL4 384 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ENPP5Q9UJA9 477 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 MYPNQ86TC9 1320 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 LCMT2O60294 686 aaKnown RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ATXN8OSP0DMR3 200 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 IL7RP16871 459 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 MAGP20916 626 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ITPKAP23677 461 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 GKP32189 559 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 NUDT1P36639 197 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 RPIAP49247 311 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ENTPD1P49961 510 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 EMX2Q04743 252 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 GPR33Q49SQ1 333 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ALG1LQ6GMV1 187 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CCBE1Q6UXH8 406 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 PLEKHH3Q7Z736 793 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 MINDY1Q8N5J2 469 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 GALNT11Q8NCW6 608 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 DNAJC19Q96DA6 116 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 PTPRHQ9HD43 1115 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms