RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 HHIPQ96QV1 700 aa18.25■□□□□ 0.51
RFTN1-201ENST00000334133 SAMHD1Q9Y3Z3 626 aaKnown RBP18.25■□□□□ 0.51
RFTN1-201ENST00000334133 ORC6Q9Y5N6 252 aa18.25■□□□□ 0.51
RFTN1-201ENST00000334133 ATG2BQ96BY7 2078 aa18.25■□□□□ 0.51
RFTN1-201ENST00000334133 SCAMP2O15127 329 aaKnown RBP18.24■□□□□ 0.51
RFTN1-201ENST00000334133 INMTO95050 263 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 SOD1P00441 154 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 FGBP02675 491 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 HTRA4P83105 476 aaPredicted RBP18.24■□□□□ 0.51
RFTN1-201ENST00000334133 SLBPQ14493 270 aaKnown RBP eCLIP18.24■□□□□ 0.51
RFTN1-201ENST00000334133 NFE2L1Q14494 772 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 DMC1Q14565 340 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 FNDC3BQ53EP0 1204 aaKnown RBP18.24■□□□□ 0.51
RFTN1-201ENST00000334133 TMC5Q6UXY8 1006 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 NEK10Q6ZWH5 1172 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 SERPINA11Q86U17 422 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 HORMAD1Q86X24 394 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 FAM9CQ8IZT9 166 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 CIDECQ96AQ7 238 aaPredicted RBP18.24■□□□□ 0.51
RFTN1-201ENST00000334133 TIFAQ96CG3 184 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 CSF3RQ99062 836 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 MAGIXQ9H6Y5 334 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 IL1RAPQ9NPH3 570 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 RASSF1Q9NS23 344 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 BAG5Q9UL15 447 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 KCNE2Q9Y6J6 123 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 EFCAB14O75071 495 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 C1orf105O95561 183 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 TRPC1P48995 793 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 PLA2G16P53816 162 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 NUP107P57740 925 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 CAMK1Q14012 370 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 COX20Q5RI15 118 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 LAIR1Q6GTX8 287 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 WDR48Q8TAF3 677 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 EZH1Q92800 747 aaPredicted RBP18.24■□□□□ 0.51
RFTN1-201ENST00000334133 GLMNQ92990 594 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 ARRDC3Q96B67 414 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 IL23AQ9NPF7 189 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 USE1Q9NZ43 259 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 EXO1Q9UQ84 846 aaKnown RBP18.24■□□□□ 0.51
RFTN1-201ENST00000334133 USP34Q70CQ2 3546 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 SLC1A7O00341 560 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 PCDH7O60245 1069 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 FABP3P05413 133 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 CISD3P0C7P0 127 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 GPX2P18283 190 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 BMPR1AP36894 532 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 CRATP43155 626 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 GPR1P46091 355 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 CRYBA2P53672 197 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 PRSS36Q5K4E3 855 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 Q6ZPB1 254 aaPredicted RBP18.24■□□□□ 0.51
RFTN1-201ENST00000334133 SLCO4C1Q6ZQN7 724 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 ALDH16A1Q8IZ83 802 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 OR52E4Q8NGH9 312 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 DNAJB8Q8NHS0 232 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 ATL1Q8WXF7 558 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 BADQ92934 168 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 ABTB1Q969K4 478 aaPredicted RBP18.24■□□□□ 0.51
RFTN1-201ENST00000334133 SIRT5Q9NXA8 310 aa18.24■□□□□ 0.51
RFTN1-201ENST00000334133 PLXNA2O75051 1894 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 H0YIV9 168 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 CPNE6O95741 557 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 NPPBP16860 134 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 HNF4AP41235 474 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 HIPK1Q86Z02 1210 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 RASGRP3Q8IV61 690 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 GPR65Q8IYL9 337 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 ATG16L2Q8NAA4 619 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 OR8J2Q8NGG1 315 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 OR4A15Q8NGL6 344 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 HDAC2Q92769 488 aaKnown RBP18.23■□□□□ 0.51
RFTN1-201ENST00000334133 TANKQ92844 425 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 YTHDF1Q9BYJ9 559 aaKnown RBP18.23■□□□□ 0.51
RFTN1-201ENST00000334133 PCDHB11Q9Y5F2 797 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 LZTS3O60299 673 aaPredicted RBP18.23■□□□□ 0.51
RFTN1-201ENST00000334133 IDSP22304 550 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 OR1E2P47887 323 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 RAD23AP54725 363 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 ZNF691Q5VV52 312 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 ARMCX6Q7L4S7 300 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 KIAA0907Q7Z7F0 614 aaPredicted RBP18.23■□□□□ 0.51
RFTN1-201ENST00000334133 OR56A3Q8NH54 315 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 AP3M1Q9Y2T2 418 aa18.23■□□□□ 0.51
RFTN1-201ENST00000334133 MTCL1Q9Y4B5 1905 aaKnown RBP18.23■□□□□ 0.51
RFTN1-201ENST00000334133 A0A0J9YVX5 310 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 NOL3O60936 208 aaKnown RBP18.22■□□□□ 0.51
RFTN1-201ENST00000334133 ETFAP13804 333 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 MAP2K4P45985 399 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 CLK3P49761 638 aaKnown RBP18.22■□□□□ 0.51
RFTN1-201ENST00000334133 CDK5R2Q13319 367 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 SKIV2LQ15477 1246 aaKnown RBP18.22■□□□□ 0.51
RFTN1-201ENST00000334133 RBM48Q5RL73 367 aaKnown RBP18.22■□□□□ 0.51
RFTN1-201ENST00000334133 KLHL35Q6PF15 583 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 SHQ1Q6PI26 577 aaKnown RBP18.22■□□□□ 0.51
RFTN1-201ENST00000334133 ZNF547Q8IVP9 402 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 PIK3C3Q8NEB9 887 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 C11orf24Q96F05 449 aaPredicted RBP18.22■□□□□ 0.51
RFTN1-201ENST00000334133 DTD2Q96FN9 168 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms