RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 ADAMDEC1O15204 470 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 KLRC4O43908 158 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 SFTPBP07988 381 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 PEX2P28328 305 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 PITPNAQ00169 270 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 TNFAIP8L3Q5GJ75 292 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 MINDY2Q8NBR6 621 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 TEX13DA0A0J9YY54 714 aaPredicted RBP10.28□□□□□ -0.76
CLN8-201ENST00000331222 SOX30O94993 753 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 GADD45AP24522 165 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 CRISP3P54108 245 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 LCP2Q13094 533 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 TYSND1Q2T9J0 566 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 FAM180BQ6P0A1 224 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 TRMT10BQ6PF06 316 aaKnown RBP10.28□□□□□ -0.76
CLN8-201ENST00000331222 TMPPEQ6ZT21 453 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 TRABD2AQ86V40 505 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 OR5J2Q8NH18 312 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 ZC3H10Q96K80 434 aaKnown RBP10.28□□□□□ -0.76
CLN8-201ENST00000331222 POLR2J3Q9H1A7 115 aaKnown RBP10.28□□□□□ -0.76
CLN8-201ENST00000331222 OR51B5Q9H339 312 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 ALG5Q9Y673 324 aa10.28□□□□□ -0.76
CLN8-201ENST00000331222 CCDC88AQ3V6T2 1871 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 KANTRA0A1W2PQU2 76 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 K7EPI3 171 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 MAGEA3P43357 314 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 RAB12Q6IQ22 244 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 KLHL36Q8N4N3 616 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 C1orf52Q8N6N3 182 aaKnown RBP10.27□□□□□ -0.76
CLN8-201ENST00000331222 KIAA1143Q96AT1 154 aaPredicted RBP10.27□□□□□ -0.76
CLN8-201ENST00000331222 ERMAPQ96PL5 475 aaPredicted RBP10.27□□□□□ -0.76
CLN8-201ENST00000331222 GPR174Q9BXC1 333 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 BCAS3Q9H6U6 928 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 CRTAC1Q9NQ79 661 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 ZNF701Q9NV72 531 aaPredicted RBP10.27□□□□□ -0.76
CLN8-201ENST00000331222 SMPD3Q9NY59 655 aaPredicted RBP10.27□□□□□ -0.76
CLN8-201ENST00000331222 PCDHGA11Q9Y5H2 935 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 CEMIPQ8WUJ3 1361 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 TACSTD2P09758 323 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 MMP8P22894 467 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 DSTNP60981 165 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 LRRC66Q68CR7 880 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 THOC6Q86W42 341 aaKnown RBP10.27□□□□□ -0.76
CLN8-201ENST00000331222 IFNL1Q8IU54 200 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 CD300LFQ8TDQ1 290 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 RASSF5Q8WWW0 418 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 FBXL18Q96ME1 805 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 DCBLD2Q96PD2 775 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 STRADBQ9C0K7 418 aa10.27□□□□□ -0.76
CLN8-201ENST00000331222 ROBO1Q9Y6N7 1651 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.27□□□□□ -0.77
CLN8-201ENST00000331222 PLK4O00444 970 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 BRINP1O60477 761 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 POP7O75817 140 aaKnown RBP10.27□□□□□ -0.77
CLN8-201ENST00000331222 FGF18O76093 207 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 SOX2P48431 317 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 FNTBP49356 437 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 IL10RBQ08334 325 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 LASP1Q14847 261 aaKnown RBP10.27□□□□□ -0.77
CLN8-201ENST00000331222 LRRC38Q5VT99 294 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 MTFR2Q6P444 385 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 P2RY8Q86VZ1 359 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 ZNF649Q9BS31 505 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 CCM2Q9BSQ5 444 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 HINT2Q9BX68 163 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 NIFKQ9BYG3 293 aaKnown RBP10.27□□□□□ -0.77
CLN8-201ENST00000331222 MAGEE1Q9HCI5 957 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 CDC14AQ9UNH5 594 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 MEMO1Q9Y316 297 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 ADGRB2O60241 1585 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 ITM2AO43736 263 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 PAK4O96013 591 aaPredicted RBP10.27□□□□□ -0.77
CLN8-201ENST00000331222 CDH1P12830 882 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 EDNRBP24530 442 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 LEPRP48357 1165 aaKnown RBP10.27□□□□□ -0.77
CLN8-201ENST00000331222 AQP4P55087 323 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 HERV-K104P61576 105 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 HTRA3P83110 453 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 GALK2Q01415 458 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 ZNF267Q14586 743 aaPredicted RBP10.27□□□□□ -0.77
CLN8-201ENST00000331222 CERS6Q6ZMG9 384 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 CCDC116Q8IYX3 515 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 ANKRD27Q96NW4 1050 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 FAM118AQ9NWS6 357 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 RDH8Q9NYR8 311 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 IFT80Q9P2H3 777 aaPredicted RBP10.27□□□□□ -0.77
CLN8-201ENST00000331222 MROH2AA6NES4 1674 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 LATO43561 262 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 IRF2P14316 349 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 TMEM11P17152 192 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 RPL5P46777 297 aaKnown RBP10.27□□□□□ -0.77
CLN8-201ENST00000331222 FKBP1CQ5VVH2 108 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 LRRC55Q6ZSA7 311 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 TMEM17Q86X19 198 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 MARCH9Q86YJ5 346 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 OR10G2Q8NGC3 310 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 DCAKDQ8WVC6 231 aa10.27□□□□□ -0.77
CLN8-201ENST00000331222 SAT2Q96F10 170 aaPredicted RBP10.27□□□□□ -0.77
CLN8-201ENST00000331222 VPS29Q9UBQ0 182 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms