RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 BTN3A3O00478 584 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 CDC123O75794 336 aaPredicted RBP15.32■□□□□ 0.04
PDGFB-201ENST00000331163 TNFP01375 233 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 S100A3P33764 101 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 MTPNP58546 118 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 HYAL2Q12891 473 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 PGM2L1Q6PCE3 622 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 SLC2A7Q6PXP3 512 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 UTS2BQ765I0 119 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 OR4K1Q8NGD4 311 aa15.32■□□□□ 0.04
PDGFB-201ENST00000331163 EXOSC8Q96B26 276 aaKnown RBP15.32■□□□□ 0.04
PDGFB-201ENST00000331163 CNOT6Q9ULM6 557 aaKnown RBP15.32■□□□□ 0.04
PDGFB-201ENST00000331163 RBMX2Q9Y388 322 aaKnown RBP15.32■□□□□ 0.04
PDGFB-201ENST00000331163 VEGFDO43915 354 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 FUCA1P04066 466 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 C8orf89P0DMQ9 161 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 NCK1P16333 377 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 PNLIPRP1P54315 467 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 CLCA4Q14CN2 919 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 C6orf136Q5SQH8 315 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 MARVELD2Q8N4S9 558 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 C17orf62Q9BQA9 187 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 MRPS30Q9NP92 439 aaKnown RBP15.31■□□□□ 0.04
PDGFB-201ENST00000331163 C6orf203Q9P0P8 240 aaPredicted RBP15.31■□□□□ 0.04
PDGFB-201ENST00000331163 MANBAO00462 879 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 C1orf105O95561 183 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 CLIC3O95833 236 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 EPORP19235 508 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 RPS3P23396 243 aaKnown RBP eCLIP15.31■□□□□ 0.04
PDGFB-201ENST00000331163 IMPA1P29218 277 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 MAGEA8P43361 318 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 ESRRGP62508 458 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 CEACAM7Q14002 265 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 MAPKAPK3Q16644 382 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 KIAA1161Q6NSJ0 714 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 MED27Q6P2C8 311 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 CYHR1Q6ZMK1 362 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 DCUN1D3Q8IWE4 304 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 FAM47BQ8NA70 645 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 FIG4Q92562 907 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 HAUS8Q9BT25 410 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 TUBB1Q9H4B7 451 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 BPTFQ12830 3046 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 PTPRSQ13332 1948 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 A0A1B0GVT2 93 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 J3QRK9 145 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 NDUFS4O43181 175 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 MAGP20916 626 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 SLC26A3P40879 764 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 OLR1P78380 273 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 SLC9A5Q14940 896 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 FAM91A1Q658Y4 838 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 FAM92BQ6ZTR7 304 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 GALNT10Q86SR1 603 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 OR5AK3PQ8NH89 298 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 FBXL8Q96CD0 374 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 APIPQ96GX9 242 aa15.31■□□□□ 0.04
PDGFB-201ENST00000331163 TTC36A6NLP5 189 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 AP2A2O94973 939 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 ALOX15P16050 662 aaPredicted RBP15.3■□□□□ 0.04
PDGFB-201ENST00000331163 CD9P21926 228 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 AP1S2P56377 157 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 SLC14A2Q15849 920 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 SPANXN4Q5MJ08 99 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 OGFOD2Q6N063 350 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 HMGN2P46Q86SG4 172 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 SFRP1Q8N474 314 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 ASB2Q96Q27 587 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 POPDC3Q9HBV1 291 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 PADI4Q9UM07 663 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 TARM1B6A8C7 271 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 PSMD11O00231 422 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 OR7A17O14581 309 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 EML2O95834 649 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 CHRNB1P11230 501 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 ME2P23368 584 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 RABL3Q5HYI8 236 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 CYP20A1Q6UW02 462 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 C16orf89Q6UX73 402 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 TMIGD1Q6UXZ0 262 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 EFL1Q7Z2Z2 1120 aaKnown RBP15.3■□□□□ 0.04
PDGFB-201ENST00000331163 KIAA0907Q7Z7F0 614 aaPredicted RBP15.3■□□□□ 0.04
PDGFB-201ENST00000331163 KCT2Q8NC54 265 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 OR52E1Q8NGJ3 308 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 OR2L2Q8NH16 312 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 RMND5BQ96G75 393 aaPredicted RBP15.3■□□□□ 0.04
PDGFB-201ENST00000331163 EQTNQ9NQ60 294 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 CROTQ9UKG9 612 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 PCDHGA4Q9Y5G9 962 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 NBASA2RRP1 2371 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 FAM149AA5PLN7 773 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 CEACAM5P06731 702 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 BCKDHBP21953 392 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 PTPN5P54829 565 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 PAGE2BQ5JRK9 111 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 GPR107Q5VW38 600 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 HUS1BQ8NHY5 278 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 TIMMDC1Q9NPL8 285 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 COLEC10Q9Y6Z7 277 aa15.3■□□□□ 0.04
PDGFB-201ENST00000331163 TRBV5-4A0A0C4DH59 114 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms