RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 OR2Y1Q8NGV0 311 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 ASB11Q8WXH4 323 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 SMPDL3AQ92484 453 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 ANKRD7Q92527 254 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 INPP5DQ92835 1189 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 MVB12AQ96EY5 273 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 VPS50Q96JG6 964 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 ELMO2Q96JJ3 720 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 NAPGQ99747 312 aaPredicted RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 EBNA1BP2Q99848 306 aaKnown RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 AARSD1Q9BTE6 412 aaKnown RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 NDC1Q9BTX1 674 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 SLC7A5P2Q9GIP4 190 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 PCBD2Q9H0N5 130 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 CHST8Q9H2A9 424 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 FAM60AQ9NP50 221 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 TXLNGQ9NUQ3 528 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 C5AR2Q9P296 337 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 G3BP2Q9UN86 482 aaKnown RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 SNX7Q9UNH6 387 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 MED16Q9Y2X0 877 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 MRPS18BQ9Y676 258 aaKnown RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 SAR1BQ9Y6B6 198 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 NUP210LQ5VU65 1888 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 PCM1Q15154 2024 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 FREM2Q5SZK8 3169 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 SPEGQ15772 3267 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 A0A1W2PQ72 361 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 CTAGE9A4FU28 777 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 EIF3HO15372 352 aaKnown RBP eCLIP6.06□□□□□ -1.446e-6■■■■□ 25.8
SMG1-201ENST00000330588 SLC28A2O43868 658 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 COQ9O75208 318 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 NIPSNAP2O75323 286 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 VPS26AO75436 327 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 KLF7O75840 302 aaPredicted RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 NEFHP12036 1026 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 CHRM3P20309 590 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 CCND1P24385 295 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 FMO4P31512 558 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 GRIA3P42263 894 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 PAFAH1B1P43034 410 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 VPS41P49754 854 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 RGS4P49798 205 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 ERV3-1Q14264 604 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 KLHL38Q2WGJ6 581 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 NKAIN1Q4KMZ8 207 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 GARNL3Q5VVW2 1013 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 FBXW10Q5XX13 1052 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 ICE2Q659A1 982 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 FCRL6Q6DN72 434 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 HIBCHQ6NVY1 386 aaPredicted RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 FBXO38Q6PIJ6 1188 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 MICALCLQ6ZW33 695 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 CYS1Q717R9 158 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 CREG2Q8IUH2 290 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 MCATQ8IVS2 390 aaKnown RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 MRPL41Q8IXM3 137 aaKnown RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 ENDOVQ8N8Q3 282 aaKnown RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 TTC29Q8NA56 475 aaPredicted RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 CD200R1Q8TD46 325 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 ANAPC16Q96DE5 110 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 FER1L6-AS2Q96M78 137 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 ZFYVE21Q9BQ24 234 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 AKIRIN1Q9H9L7 192 aaPredicted RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 NSMCE4AQ9NXX6 385 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 TAS2R13Q9NYV9 303 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 ASIC3Q9UHC3 531 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 FBXO9Q9UK97 447 aaPredicted RBP6.06□□□□□ -1.44
SMG1-201ENST00000330588 CRYL1Q9Y2S2 319 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 ZNF451Q9Y4E5 1061 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 MAD1L1Q9Y6D9 718 aa6.06□□□□□ -1.44
SMG1-201ENST00000330588 CHD6Q8TD26 2715 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 IGLV3-12A0A075B6K2 115 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 SLC22A31A6NKX4 558 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 ARHGEF33A8MVX0 844 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 E7ESA3 106 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 ZNF185O15231 689 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 ZBTB14O43829 449 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 DPM1O60762 260 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 IPO13O94829 963 aaKnown RBP6.05□□□□□ -1.44
SMG1-201ENST00000330588 ENO2P09104 434 aaPredicted RBP6.05□□□□□ -1.44
SMG1-201ENST00000330588 ITGAXP20702 1163 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 FOLR3P41439 243 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 BDKRB1P46663 353 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 PNLIPRP1P54315 467 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 AP1S2P56377 157 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 ARL4CP56559 192 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 DR1Q01658 176 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 PRDX1Q06830 199 aaKnown RBP6.05□□□□□ -1.44
SMG1-201ENST00000330588 IL10RAQ13651 578 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 SF1Q15637 639 aaKnown RBP6.05□□□□□ -1.44
SMG1-201ENST00000330588 MUM1Q2TAK8 710 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 PRTGQ2VWP7 1150 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 ACSBG2Q5FVE4 666 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.05□□□□□ -1.44
SMG1-201ENST00000330588 PRAMEF13Q5VWM6 474 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 ZNF425Q6IV72 752 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 ZNF549Q6P9A3 640 aa6.05□□□□□ -1.44
SMG1-201ENST00000330588 FAM199XQ6PEV8 388 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms