RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 PABPC5Q96DU9 382 aaKnown RBP8.12□□□□□ -1.11
SKA2-201ENST00000330137 AARSD1Q9BTE6 412 aaKnown RBP8.12□□□□□ -1.11
SKA2-201ENST00000330137 PPIL3Q9H2H8 161 aaKnown RBP8.12□□□□□ -1.11
SKA2-201ENST00000330137 RNF167Q9H6Y7 350 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 ANKRA2Q9H9E1 313 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 PCDHB16Q9NRJ7 776 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 GKN1Q9NS71 199 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 RNF146Q9NTX7 359 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 THUMPD1Q9NXG2 353 aaKnown RBP8.12□□□□□ -1.11
SKA2-201ENST00000330137 SLC25A37Q9NYZ2 338 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 RAB23Q9ULC3 237 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 ZNF490Q9ULM2 529 aaPredicted RBP8.12□□□□□ -1.11
SKA2-201ENST00000330137 SSR3Q9UNL2 185 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 MYLKQ15746 1914 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 C7orf66A4D0T2 115 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 ASB14A6NK59 587 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 SUPT3HB4E1H0 165 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 SLC28A1O00337 649 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 LYRM1O43325 122 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 PMPCBO75439 489 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 TNFRSF21O75509 655 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 ESR1P03372 595 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 SLC2A4P14672 509 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 HOXB9P17482 250 aaPredicted RBP8.12□□□□□ -1.11
SKA2-201ENST00000330137 PTPRAP18433 802 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 ITGB6P18564 788 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 KELP23276 732 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 CLCNKAP51800 687 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 SNRPD2P62316 118 aaKnown RBP8.12□□□□□ -1.11
SKA2-201ENST00000330137 CYP4F2P78329 520 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 UBE3AQ05086 875 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 GTF2H3Q13889 308 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 VEZF1Q14119 521 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 SSX1Q16384 188 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 PAN2Q504Q3 1202 aaKnown RBP8.12□□□□□ -1.11
SKA2-201ENST00000330137 FAM171A1Q5VUB5 890 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 EEF1DP3Q658K8 133 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 PAMR1Q6UXH9 720 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 ELMO1Q92556 727 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 DIRAS2Q96HU8 199 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 P2RY13Q9BPV8 354 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 MRPL45Q9BRJ2 306 aaKnown RBP8.12□□□□□ -1.11
SKA2-201ENST00000330137 ZNF416Q9BWM5 594 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 PRR14Q9BWN1 585 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 SLC25A51Q9H1U9 297 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 TDRD3Q9H7E2 651 aaKnown RBP8.12□□□□□ -1.11
SKA2-201ENST00000330137 RC3H2Q9HBD1 1191 aaKnown RBP8.12□□□□□ -1.11
SKA2-201ENST00000330137 SEMA4BQ9NPR2 832 aaPredicted RBP8.12□□□□□ -1.11
SKA2-201ENST00000330137 ZNF275Q9NSD4 429 aaPredicted RBP8.12□□□□□ -1.11
SKA2-201ENST00000330137 PIGVQ9NUD9 493 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 UBP1Q9NZI7 540 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 ZNF225Q9UK10 706 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 FZD1Q9UP38 647 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 PADI2Q9Y2J8 665 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 CSADQ9Y600 493 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 CDH10Q9Y6N8 788 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 LOC285556D6RIA3 1793 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 SCN9AQ15858 1988 aa8.12□□□□□ -1.11
SKA2-201ENST00000330137 CITO14578 2027 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 hCG_1807616A0A1W2PRN6 198 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 FGF10O15520 208 aaPredicted RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 RGS14O43566 566 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 SCN2BO60939 215 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 CRYBB2P43320 205 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 RECQLP46063 649 aaPredicted RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 MAPKAPK2P49137 400 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 TIAL1Q01085 375 aaKnown RBP eCLIP8.11□□□□□ -1.11
SKA2-201ENST00000330137 DBPQ10586 325 aaPredicted RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 MLLT11Q13015 90 aaPredicted RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 TP53BP2Q13625 1128 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 ELOAQ14241 798 aaKnown RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 NCF4Q15080 339 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 STXBP2Q15833 593 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 PYDC2Q56P42 97 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 ATPAF2Q8N5M1 289 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 SLC37A3Q8NCC5 494 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 MARC2Q969Z3 335 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 SENP8Q96LD8 212 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 PCYT2Q99447 389 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 TTPALQ9BTX7 342 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 MIXL1Q9H2W2 232 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 ADARB2Q9NS39 739 aaKnown RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 MPP6Q9NZW5 540 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 EMC3Q9P0I2 261 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 ABCG2Q9UNQ0 655 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 COL4A4P53420 1690 aaPredicted RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 SLC12A8A0AV02 714 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 ZNF98A6NK75 572 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 MYO1GB0I1T2 1018 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 INMT-MINDY4F8WBC2 141 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 FAM72CH0Y354 149 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 ADAMDEC1O15204 470 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 FABP7O15540 132 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 LALBAP00709 142 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 S100A6P06703 90 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 SLC2A2P11168 524 aaPredicted RBP8.11□□□□□ -1.11
SKA2-201ENST00000330137 ANXA3P12429 323 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 ACPPP15309 386 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 HOXC13P31276 330 aa8.11□□□□□ -1.11
SKA2-201ENST00000330137 DGKQP52824 942 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms