RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 STSP08842 583 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 HIST1H2AGP0C0S8 130 aaPredicted RBP16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 HIST1H2ADP20671 130 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 GRK3P35626 688 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 TBPL1P62380 186 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 MPP1Q00013 466 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 EEF1A2Q05639 463 aaKnown RBP16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 PCOLCEQ15113 449 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 PPP1R7Q15435 360 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 SPANXN3Q5MJ09 141 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 TMEM214Q6NUQ4 689 aaKnown RBP16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 VN1R4Q7Z5H5 301 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 SLC34A3Q8N130 599 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 EEF1AKMT1Q8WVE0 214 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 SLCO2A1Q92959 643 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 HIST1H2AHQ96KK5 128 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 OSBPL9Q96SU4 736 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 CYTH2Q99418 400 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 HIST1H2AJQ99878 128 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 H2AFJQ9BTM1 129 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 SGPP1Q9BX95 441 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 IARS2Q9NSE4 1012 aaKnown RBP16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 ABCF3Q9NUQ8 709 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 C19orf25Q9UFG5 118 aaPredicted RBP16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 PDE10AQ9Y233 779 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 OSGIN2Q9Y236 505 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 SLC22A7Q9Y694 548 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 CACNA1DQ01668 2161 aa16.76■□□□□ 0.27
PTPMT1-201ENST00000326656 SCN2AQ99250 2005 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 FFAR3O14843 346 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 GPR42O15529 346 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 LRRTM2O43300 516 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 BCL6P41182 706 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 CSNK1G2P78368 415 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 CRYMQ14894 314 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 ABHD17BQ5VST6 288 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 FAAH2Q6GMR7 532 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 AGTRAPQ6RW13 159 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 PLD3Q8IV08 490 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 CNTN4Q8IWV2 1026 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 MYO1HQ8N1T3 1032 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 OR9A4Q8NGU2 314 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 DNAJB8Q8NHS0 232 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 SUN3Q8TAQ9 357 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 HAUS8Q9BT25 410 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 SARGQ9BW04 601 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 VN1R1Q9GZP7 353 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 ANKHQ9HCJ1 492 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 STMN3Q9NZ72 180 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 CORO1CQ9ULV4 474 aaPredicted RBP16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 CPAMD8Q8IZJ3 1885 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 CREBBPQ92793 2442 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 LRBAP50851 2863 aa16.75■□□□□ 0.27
PTPMT1-201ENST00000326656 JRKO75564 520 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 CRYABP02511 175 aaKnown RBP16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 UQCRHP07919 91 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 NPPBP16860 134 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 DCTP40126 519 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 AGTR2P50052 363 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 AP1S2P56377 157 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 IL2P60568 153 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 TIAL1Q01085 375 aaKnown RBP eCLIP16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 SYT16Q17RD7 645 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 PLAG1Q6DJT9 500 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 CAPN13Q6MZZ7 669 aaPredicted RBP16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 NIPAL1Q6NVV3 410 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 PAQR3Q6TCH7 311 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 LCTLQ6UWM7 567 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 CPEB2Q7Z5Q1 589 aaKnown RBP16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 SIRT6Q8N6T7 355 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 ABHD11Q8NFV4 315 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 OR51Q1Q8NH59 317 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 NR4A3Q92570 626 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 TRIM54Q9BYV2 358 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 PLA2G3Q9NZ20 509 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 ADAMTS6Q9UKP5 1117 aa16.74■□□□□ 0.27
PTPMT1-201ENST00000326656 OR5H15A6NDH6 313 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 CDK2AP1O14519 115 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 DNALI1O14645 258 aaPredicted RBP16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 ZSCAN12O43309 604 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 AHSGP02765 367 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 F7P08709 466 aaPredicted RBP16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 SLC35G6P0C7Q6 338 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 GABRB3P28472 473 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 SKP1P63208 163 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 MAT1AQ00266 395 aaKnown RBP16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 NAE1Q13564 534 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 DUPD1Q68J44 220 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 H3F3CQ6NXT2 135 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 ASPGQ86U10 573 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 MFSD9Q8NBP5 474 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 OR4K1Q8NGD4 311 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 SLC13A3Q8WWT9 602 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 ATL1Q8WXF7 558 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 RELTQ969Z4 430 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 TAAR6Q96RI8 345 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 NDNQ99608 321 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 ABI3Q9P2A4 366 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms