RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 ZNF317Q96PQ6 595 aaPredicted RBP6.31□□□□□ -1.4
CSTF3-201ENST00000323959 PAFAH2Q99487 392 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 CPNE1Q99829 537 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 PCDH12Q9NPG4 1184 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 TREX1Q9NSU2 369 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 ZC3H7BQ9UGR2 993 aaKnown RBP6.31□□□□□ -1.4
CSTF3-201ENST00000323959 RPL26L1Q9UNX3 145 aaKnown RBP6.31□□□□□ -1.4
CSTF3-201ENST00000323959 TRBV23OR9-2A0A075B6M9 112 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 ZCWPW2A0A1B0GU75 182 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 SNUPNO95149 360 aaKnown RBP6.31□□□□□ -1.4
CSTF3-201ENST00000323959 ACSL3O95573 720 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 ZBTB11O95625 1053 aaPredicted RBP6.31□□□□□ -1.4
CSTF3-201ENST00000323959 ASMTLO95671 621 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 FAM107AO95990 144 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 POLBP06746 335 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 ITGA2P17301 1181 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 UQCRC1P31930 480 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 LSP1P33241 339 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 MGAT5Q09328 741 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 GRTP1Q5TC63 336 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 MRPL14Q6P1L8 145 aaKnown RBP6.31□□□□□ -1.4
CSTF3-201ENST00000323959 PRUNE1Q86TP1 453 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 LRRC6Q86X45 466 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 ANKS4BQ8N8V4 417 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 GPR150Q8NGU9 434 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 ARRDC2Q8TBH0 407 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 FBF1Q8TES7 1133 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 CKAP2Q8WWK9 683 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 MAGEB18Q96M61 343 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 FRMD6Q96NE9 622 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 PSKH2Q96QS6 385 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 TRIB3Q96RU7 358 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 TBL1YQ9BQ87 522 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 C12orf65Q9H3J6 166 aaKnown RBP6.31□□□□□ -1.4
CSTF3-201ENST00000323959 POT1Q9NUX5 634 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 PLA2G3Q9NZ20 509 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 BFARQ9NZS9 450 aa6.31□□□□□ -1.4
CSTF3-201ENST00000323959 KLHL8Q9P2G9 620 aaPredicted RBP6.31□□□□□ -1.4
CSTF3-201ENST00000323959 DYNC2H1Q8NCM8 4307 aaKnown RBP6.31□□□□□ -1.4
CSTF3-201ENST00000323959 FAM170AA1A519 330 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 MROH6A6NGR9 719 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 RAMP2O60895 175 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 APRTP07741 180 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 HLA-DPA1P20036 260 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 CDK3Q00526 305 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 PMPCAQ10713 525 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 IHHQ14623 411 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 CRYMQ14894 314 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 GPR19Q15760 415 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 PDPK2PQ6A1A2 396 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 TAX1BP1Q86VP1 789 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 LGI4Q8N135 537 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 POGLUT1Q8NBL1 392 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 GABPB2Q8TAK5 448 aaPredicted RBP6.3□□□□□ -1.4
CSTF3-201ENST00000323959 ZNF398Q8TD17 642 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 CDKL2Q92772 493 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 SCMH1Q96GD3 660 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 VPS11Q9H270 941 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 WDR54Q9H977 334 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 HERC2O95714 4834 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 BIRC5O15392 142 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 EML2O95834 649 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 HLA-DQB2P05538 268 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 SNRPAP09012 282 aaKnown RBP6.3□□□□□ -1.4
CSTF3-201ENST00000323959 COL6A2P12110 1019 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 NFKB1P19838 968 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 ADRA1DP25100 572 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 SLC26A3P40879 764 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 MSH2P43246 934 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 ETV4P43268 484 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 ACTG1P63261 375 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 GNA12Q03113 381 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 PTCHD3Q3KNS1 767 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 ABHD17CQ6PCB6 329 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 BRAT1Q6PJG6 821 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 PID1Q7Z2X4 250 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 PIGWQ7Z7B1 504 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 CCDC25Q86WR0 208 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 BBS5Q8N3I7 341 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 NSMCE1Q8WV22 266 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 IGFBPL1Q8WX77 278 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 APOPT1Q96IL0 206 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 MRGPRX2Q96LB1 330 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 NUDCD1Q96RS6 583 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 PLCD4Q9BRC7 762 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 SUDS3Q9H7L9 328 aaPredicted RBP6.3□□□□□ -1.4
CSTF3-201ENST00000323959 VANGL2Q9ULK5 521 aa6.3□□□□□ -1.4
CSTF3-201ENST00000323959 A0A1W2PQ67 120 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 TUBAL3A6NHL2 446 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 WISP2O76076 250 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 VIPP01282 170 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 SERPINA7P05543 415 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 KRT15P19012 456 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 CRHR1P34998 444 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 VPS41P49754 854 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 ITIH4Q14624 930 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 CLEC12BQ2HXU8 276 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 BBS9Q3SYG4 887 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 ALFQ53S48 1182 aa6.29□□□□□ -1.4
CSTF3-201ENST00000323959 ZNF789Q5FWF6 425 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms