RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 TAF8Q7Z7C8 310 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 NFKBIDQ8NI38 313 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 ZNF480Q8WV37 535 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 DNAJA3Q96EY1 480 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 TPSD1Q9BZJ3 242 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 PTBP2Q9UKA9 531 aaKnown RBP13.14□□□□□ -0.31
SRRM1-201ENST00000323848 ENTPD4Q9Y227 616 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 PI15O43692 258 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 RAP2AP10114 183 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 HNMTP50135 292 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 LRRC70Q7Z2Q7 622 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 CPXM2Q8N436 756 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 TRAM1L1Q8N609 369 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 FAM81AQ8TBF8 368 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 SLC12A9Q9BXP2 914 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 ZCCHC3Q9NUD5 404 aaKnown RBP13.14□□□□□ -0.31
SRRM1-201ENST00000323848 RAB26Q9ULW5 256 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 LOC285556D6RIA3 1793 aa13.14□□□□□ -0.31
SRRM1-201ENST00000323848 LINC01565O15544 149 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 CDC123O75794 336 aaPredicted RBP13.13□□□□□ -0.31
SRRM1-201ENST00000323848 IL3P08700 152 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 GJA4P35212 333 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 INHBCP55103 352 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 ROR2Q01974 943 aaKnown RBP13.13□□□□□ -0.31
SRRM1-201ENST00000323848 DYNC1I2Q13409 638 aaKnown RBP13.13□□□□□ -0.31
SRRM1-201ENST00000323848 RCAN2Q14206 197 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 UBXN2BQ14CS0 331 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 MEX3DQ86XN8 651 aaKnown RBP13.13□□□□□ -0.31
SRRM1-201ENST00000323848 PLEKHA8Q96JA3 519 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 HEBP1Q9NRV9 189 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 RAD18Q9NS91 495 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 PRUNE2Q8WUY3 3088 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 PRAMEF33A0A0G2JMD5 474 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 OTOL1A6NHN0 477 aaPredicted RBP13.13□□□□□ -0.31
SRRM1-201ENST00000323848 AQP12BA6NM10 295 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 GNB5O14775 395 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 ARHGEF15O94989 841 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 SOX14O95416 240 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 H6PDO95479 791 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 TIAL1Q01085 375 aaKnown RBP eCLIP13.13□□□□□ -0.31
SRRM1-201ENST00000323848 HNRNPA1L2Q32P51 320 aaKnown RBP13.13□□□□□ -0.31
SRRM1-201ENST00000323848 TMC8Q8IU68 726 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 AQP12AQ8IXF9 295 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 SLC5A11Q8WWX8 675 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 ASB11Q8WXH4 323 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 LRRC3BQ96PB8 259 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 BTBD9Q96Q07 612 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 GALNT8Q9NY28 637 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 TMEM181Q9P2C4 612 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 SEC14L3Q9UDX4 400 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 DICER1Q9UPY3 1922 aaKnown RBP13.13□□□□□ -0.31
SRRM1-201ENST00000323848 M0R129 80 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 BCHEP06276 602 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 ENO2P09104 434 aaPredicted RBP13.13□□□□□ -0.31
SRRM1-201ENST00000323848 RRM2P31350 389 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 CCR4P51679 360 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 B4GALNT1Q00973 533 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 TRAP1Q12931 704 aaKnown RBP13.13□□□□□ -0.31
SRRM1-201ENST00000323848 CST6Q15828 149 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 MPP7Q5T2T1 576 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 KCTD8Q6ZWB6 473 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 C11orf65Q8NCR3 313 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 RORBQ92753 470 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 IL4I1Q96RQ9 567 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 BRINP2Q9C0B6 783 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 TPK1Q9H3S4 243 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 TOR3AQ9H497 397 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 PRDM8Q9NQV8 689 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 LYVE1Q9Y5Y7 322 aa13.13□□□□□ -0.31
SRRM1-201ENST00000323848 ATP6V1G1O75348 118 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 PPP2R1BP30154 601 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 EEFSECP57772 596 aaKnown RBP13.12□□□□□ -0.31
SRRM1-201ENST00000323848 OLR1P78380 273 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 ITPRIPL2Q3MIP1 535 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 PDCD4Q53EL6 469 aaKnown RBP13.12□□□□□ -0.31
SRRM1-201ENST00000323848 TTC23Q5W5X9 447 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 PPP4R4Q6NUP7 873 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 METTL27Q8N6F8 245 aaPredicted RBP13.12□□□□□ -0.31
SRRM1-201ENST00000323848 WDR48Q8TAF3 677 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 CEP19Q96LK0 163 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 P2RY12Q9H244 342 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 CUEDC1Q9NWM3 386 aaPredicted RBP13.12□□□□□ -0.31
SRRM1-201ENST00000323848 SOHLH2Q9NX45 425 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 OR51B4Q9Y5P0 310 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 SCN3AQ9NY46 2000 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 FABP3P05413 133 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 RB1P06400 928 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 POLR2CP19387 275 aaPredicted RBP13.12□□□□□ -0.31
SRRM1-201ENST00000323848 ACVR1Q04771 509 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 SYT16Q17RD7 645 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 TRIM40Q6P9F5 258 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 CCDC116Q8IYX3 515 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 MMP21Q8N119 569 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 HMGCLL1Q8TB92 370 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 CNIH3Q8TBE1 160 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 WFIKKN2Q8TEU8 576 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 ALG14Q96F25 216 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 HSH2DQ96JZ2 352 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 COL21A1Q96P44 957 aa13.12□□□□□ -0.31
SRRM1-201ENST00000323848 IKZF5Q9H5V7 419 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms