RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 UBTD2Q8WUN7 234 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 NKD1Q969G9 470 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 NSUN5Q96P11 429 aaKnown RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 TEFMQ96QE5 360 aaKnown RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 OR2A5Q96R48 311 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 RUFY1Q96T51 708 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 MRPL57Q9BQC6 102 aaKnown RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 ZPBPQ9BS86 351 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 ROPN1BQ9BZX4 212 aaPredicted RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 SPRY4Q9C004 299 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 SLC7A5P2Q9GIP4 190 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 MRPL46Q9H2W6 279 aaKnown RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 CNOT10Q9H9A5 744 aaKnown RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 ACTR5Q9H9F9 607 aaPredicted RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 ROPN1Q9HAT0 212 aaPredicted RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 ANKMY1Q9P2S6 941 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 OPTCQ9UBM4 332 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 DKK4Q9UBT3 224 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 NDOR1Q9UHB4 597 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 LGALS13Q9UHV8 139 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 MRPS2Q9Y399 296 aaKnown RBP7.51□□□□□ -1.21
CDC42-201ENST00000315554 ANGPTL3Q9Y5C1 460 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 KLK4Q9Y5K2 254 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 SDK2Q58EX2 2172 aa7.51□□□□□ -1.21
CDC42-201ENST00000315554 TPRP12270 2363 aaKnown RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 LOC101059948A0A1B0GTJ6 334 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 A8MT66 165 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 FFAR3O14843 346 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 RGS16O15492 202 aaPredicted RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 GPR42O15529 346 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 KLK8O60259 260 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 DLX3O60479 287 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 CPNE3O75131 537 aaKnown RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 GLRA3O75311 464 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 IPO13O94829 963 aaKnown RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 EZRP15311 586 aaKnown RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 CD22P20273 847 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 ALAS2P22557 587 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 SOX11P35716 441 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 ARL1P40616 181 aaPredicted RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 ALDH18A1P54886 795 aaKnown RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 FOXL2P58012 376 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 REEP5Q00765 189 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 CHIT1Q13231 466 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 DOC2AQ14183 400 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 SLBPQ14493 270 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDC42-201ENST00000315554 NAA25Q14CX7 972 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 RASA2Q15283 850 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 RBBP5Q15291 538 aaKnown RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 ST3GAL2Q16842 350 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 XKR6Q5GH73 641 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 CDKL4Q5MAI5 379 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 FAM69BQ5VUD6 431 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 ADNP2Q6IQ32 1131 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 CYB5D1Q6P9G0 228 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 SLCO4C1Q6ZQN7 724 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 TTLL10Q6ZVT0 673 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 LRRC70Q7Z2Q7 622 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 GOLGA7Q7Z5G4 137 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 VN1R4Q7Z5H5 301 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 MYLK4Q86YV6 388 aaPredicted RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 SPACA3Q8IXA5 215 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 KLHDC8AQ8IYD2 350 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 NLGN4XQ8N0W4 816 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 IQCKQ8N0W5 287 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 RIBC1Q8N443 379 aaPredicted RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 IL22RA1Q8N6P7 574 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 CSNK1A1LQ8N752 337 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 CCDC63Q8NA47 563 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 TTC29Q8NA56 475 aaPredicted RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 KDF1Q8NAX2 398 aaPredicted RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 ZNF248Q8NDW4 579 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 ABHD11Q8NFV4 315 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 NLGN4YQ8NFZ3 816 aaPredicted RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 OR8K5Q8NH50 307 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 ZCCHC10Q8TBK6 192 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 MR1Q95460 341 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 RERGQ96A58 199 aaPredicted RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 CRELD1Q96HD1 420 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 NDC1Q9BTX1 674 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 TMEM109Q9BVC6 243 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 CHRNA10Q9GZZ6 450 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 PELI2Q9HAT8 420 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 CUTCQ9NTM9 273 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 DCDC2Q9UHG0 476 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 PRDM4Q9UKN5 801 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 RUVBL1Q9Y265 456 aaKnown RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 TMEM184BQ9Y519 407 aaPredicted RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 MRPS18BQ9Y676 258 aaKnown RBP7.5□□□□□ -1.21
CDC42-201ENST00000315554 KCNE2Q9Y6J6 123 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 SPTBP11277 2137 aa7.5□□□□□ -1.21
CDC42-201ENST00000315554 HYKKA2RU49 373 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 TMEM8BA6NDV4 472 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 SRRM3A6NNA2 597 aaPredicted RBP7.49□□□□□ -1.21
CDC42-201ENST00000315554 K7EPI3 171 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 PPP6CO00743 305 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 RRP8O43159 456 aaKnown RBP7.49□□□□□ -1.21
CDC42-201ENST00000315554 PLIN3O60664 434 aa7.49□□□□□ -1.21
CDC42-201ENST00000315554 SH3BGRLO75368 114 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms