RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 TRBC2A0A5B9 178 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 KATNA1O75449 491 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 TBX6O95947 436 aaPredicted RBP8.68□□□□□ -1.02
PDE4D-201ENST00000309641 B3GALT4O96024 378 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 CPA3P15088 417 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 HRH2P25021 359 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 PIK3CGP48736 1102 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 PRKAA2P54646 552 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 FOXL2P58012 376 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 HERVK_113P63132 956 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 NFKB2Q00653 900 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 REEP5Q00765 189 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 IRF8Q02556 426 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 TRAF3Q13114 568 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 RBBP5Q15291 538 aaKnown RBP8.68□□□□□ -1.02
PDE4D-201ENST00000309641 PRTGQ2VWP7 1150 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 CCDC153Q494R4 210 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 ZNF678Q5SXM1 525 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 FAM69BQ5VUD6 431 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 ATG9BQ674R7 924 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 PRSS41Q7RTY9 318 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 VN1R5Q7Z5H4 357 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 C10orf107Q8IVU9 208 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 GPR135Q8IZ08 494 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 ARHGEF39Q8N4T4 335 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 METTL27Q8N6F8 245 aaPredicted RBP8.68□□□□□ -1.02
PDE4D-201ENST00000309641 CSNK1A1LQ8N752 337 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 CCDC63Q8NA47 563 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.68□□□□□ -1.02
PDE4D-201ENST00000309641 ZCCHC14Q8WYQ9 949 aaKnown RBP8.68□□□□□ -1.02
PDE4D-201ENST00000309641 NKD1Q969G9 470 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 C10orf90Q96M02 699 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 CNTNAP3BQ96NU0 1288 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 TEFMQ96QE5 360 aaKnown RBP8.68□□□□□ -1.02
PDE4D-201ENST00000309641 ERVK-6Q9BXR3 956 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 CNTNAP3Q9BZ76 1288 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 AICDAQ9GZX7 198 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 ACTR5Q9H9F9 607 aaPredicted RBP8.68□□□□□ -1.02
PDE4D-201ENST00000309641 PELI2Q9HAT8 420 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 FANCEQ9HB96 536 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 COPG2Q9UBF2 871 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 ACSL6Q9UKU0 697 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 RNF11Q9Y3C5 154 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 ANGPTL3Q9Y5C1 460 aa8.68□□□□□ -1.02
PDE4D-201ENST00000309641 KCNE1BA0A087WTH5 132 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 STMND1H3BQB6 276 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 CLGNO14967 610 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 SRPX2O60687 465 aaPredicted RBP8.67□□□□□ -1.02
PDE4D-201ENST00000309641 SUPT7LO94864 414 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 SERPIND1P05546 499 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 MYL2P10916 166 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 WT1P19544 449 aaPredicted RBP8.67□□□□□ -1.02
PDE4D-201ENST00000309641 TAC1P20366 129 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 ITGAXP20702 1163 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 RORAP35398 523 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 ETV4P43268 484 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 SCTRP47872 440 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 NAGLUP54802 743 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 MAGOHP61326 146 aaKnown RBP8.67□□□□□ -1.02
PDE4D-201ENST00000309641 RPS15AP62244 130 aaKnown RBP8.67□□□□□ -1.02
PDE4D-201ENST00000309641 FOXK2Q01167 660 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 RELAQ04206 551 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 CLN3Q13286 438 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 ITPR1Q14643 2758 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 SLC9A5Q14940 896 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 ZNF385CQ66K41 422 aaPredicted RBP8.67□□□□□ -1.02
PDE4D-201ENST00000309641 TMIGD1Q6UXZ0 262 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 ATG14Q6ZNE5 492 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 TTLL10Q6ZVT0 673 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 HDXQ7Z353 690 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 VASH2Q86V25 355 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 PROSER1Q86XN7 944 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 MYLK4Q86YV6 388 aaPredicted RBP8.67□□□□□ -1.02
PDE4D-201ENST00000309641 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.67□□□□□ -1.02
PDE4D-201ENST00000309641 MFSD9Q8NBP5 474 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 OR8K5Q8NH50 307 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 SNIP1Q8TAD8 396 aaKnown RBP8.67□□□□□ -1.02
PDE4D-201ENST00000309641 TRPC4APQ8TEL6 797 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 ZNF483Q8TF39 744 aaPredicted RBP8.67□□□□□ -1.02
PDE4D-201ENST00000309641 TLCD1Q96CP7 247 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 CLIP3Q96DZ5 547 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 TM4SF19Q96DZ7 209 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 DCBLD2Q96PD2 775 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 AIF1LQ9BQI0 150 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 ZPBPQ9BS86 351 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 SARGQ9BW04 601 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 MLXIPLQ9NP71 852 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 TNFRSF12AQ9NP84 129 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 SLC22A11Q9NSA0 550 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 GPRC5BQ9NZH0 403 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 PCDHB3Q9Y5E6 796 aa8.67□□□□□ -1.02
PDE4D-201ENST00000309641 TNPO3Q9Y5L0 923 aaKnown RBP8.67□□□□□ -1.02
PDE4D-201ENST00000309641 LOC101059948A0A1B0GTJ6 334 aa8.66□□□□□ -1.02
PDE4D-201ENST00000309641 HYKKA2RU49 373 aa8.66□□□□□ -1.02
PDE4D-201ENST00000309641 FITM1A5D6W6 292 aa8.66□□□□□ -1.02
PDE4D-201ENST00000309641 C4orf51C9J302 202 aa8.66□□□□□ -1.02
PDE4D-201ENST00000309641 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.66□□□□□ -1.02
PDE4D-201ENST00000309641 MEN1O00255 615 aa8.66□□□□□ -1.02
PDE4D-201ENST00000309641 UBFD1O14562 309 aaKnown RBP8.66□□□□□ -1.02
PDE4D-201ENST00000309641 RAD1O60671 282 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms