RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 BTG3Q14201 252 aaPredicted RBP18.73■□□□□ 0.59
USP48-201ENST00000308271 CBX2Q14781 532 aaPredicted RBP18.73■□□□□ 0.59
USP48-201ENST00000308271 DEFB128Q7Z7B8 93 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 SLC7A5P1Q8MH63 180 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 ERVK13-1Q9NX77 482 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 DNAJC27Q9NZQ0 273 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 MGAT4BQ9UQ53 548 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 GPR45Q9Y5Y3 372 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 HMX2A2RU54 273 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 SLC38A8A6NNN8 435 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 MID1O15344 667 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 ENTPD6O75354 484 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 LAMP2P13473 410 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 RPS3P23396 243 aaKnown RBP eCLIP18.73■□□□□ 0.59
USP48-201ENST00000308271 RYKP34925 604 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 MAP2K3P46734 347 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 NOXRED1Q6NXP6 359 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 TNFAIP8L1Q8WVP5 186 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 LMAN2LQ9H0V9 348 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 EQTNQ9NQ60 294 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 CD84Q9UIB8 345 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 IFT52Q9Y366 437 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 PLOD2O00469 737 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 ARL4DP49703 201 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 CLDN8P56748 225 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 ADGRF1Q5T601 910 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 OAFQ86UD1 273 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 GALNT13Q8IUC8 556 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 C2orf15Q8WU43 125 aaKnown RBP18.73■□□□□ 0.59
USP48-201ENST00000308271 POF1BQ8WVV4 589 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 TMLHEQ9NVH6 421 aa18.73■□□□□ 0.59
USP48-201ENST00000308271 SLC9A3R1O14745 358 aaPredicted RBP18.72■□□□□ 0.59
USP48-201ENST00000308271 PI15O43692 258 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 OR1I1O60431 355 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 OR2B3O76000 313 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 PRLP01236 227 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 CXCR4P61073 352 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 TOMM5Q8N4H5 51 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 C3orf30Q96M34 536 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 WACQ9BTA9 647 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 SPATA9Q9BWV2 254 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 SLC7A5P2Q9GIP4 190 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 KDELR3O43731 214 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 LCKP06239 509 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 FOXA1P55317 472 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 SPCS2Q15005 226 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 KCNJ8Q15842 424 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 GPRIN1Q7Z2K8 1008 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 PHYKPLQ8IUZ5 450 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 TRIB3Q96RU7 358 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 FAM129BQ96TA1 746 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 ASGR1P07306 291 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 HAPLN1P10915 354 aaPredicted RBP18.72■□□□□ 0.59
USP48-201ENST00000308271 OR10H4Q8NGA5 316 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 ISL2Q96A47 359 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 PSKH2Q96QS6 385 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 ZNF717Q9BY31 904 aaPredicted RBP18.72■□□□□ 0.59
USP48-201ENST00000308271 CFAP97Q9P2B7 532 aa18.72■□□□□ 0.59
USP48-201ENST00000308271 DAPL1A0PJW8 107 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 ARNTLO00327 626 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 PRR5P85299 388 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 EMX1Q04741 257 aaPredicted RBP18.71■□□□□ 0.59
USP48-201ENST00000308271 BIKQ13323 160 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 MEDAGQ5VYS4 303 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 CFAP206Q8IYR0 622 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 TCEANCQ8N8B7 351 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 SRFBP1Q8NEF9 429 aaKnown RBP18.71■□□□□ 0.59
USP48-201ENST00000308271 OR5AK3PQ8NH89 298 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 RPL10LQ96L21 214 aaKnown RBP18.71■□□□□ 0.59
USP48-201ENST00000308271 AGAP5A6NIR3 686 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 AQP9O43315 295 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 PLA2G4EQ3MJ16 856 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 DESI1Q6ICB0 168 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 FUT10Q6P4F1 479 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 RHOXF1Q8NHV9 184 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 GORASP2Q9H8Y8 452 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 MAT2BQ9NZL9 334 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 OARD1Q9Y530 152 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 GOLGA4Q13439 2230 aaKnown RBP18.71■□□□□ 0.59
USP48-201ENST00000308271 MNDAP41218 407 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 PPP3R1P63098 170 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 SOX4Q06945 474 aaPredicted RBP18.71■□□□□ 0.59
USP48-201ENST00000308271 RBBP4Q09028 425 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 RETREG3Q86VR2 466 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 SNX33Q8WV41 574 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 CLCA1A8K7I4 914 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 ECDO95905 644 aaPredicted RBP18.71■□□□□ 0.59
USP48-201ENST00000308271 NR4A2P43354 598 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 DGKGP49619 791 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 KHKP50053 298 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 ERVPABLB-1P60509 514 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 SPHARQ15513 63 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 ZNF558Q96NG5 402 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 RHBGQ9H310 441 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 TREX1Q9NSU2 369 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 MED11Q9P086 117 aa18.71■□□□□ 0.59
USP48-201ENST00000308271 URADA6NGE7 173 aa18.7■□□□□ 0.58
USP48-201ENST00000308271 TCEA1P23193 301 aaKnown RBP18.7■□□□□ 0.58
USP48-201ENST00000308271 HTR6P50406 440 aa18.7■□□□□ 0.58
USP48-201ENST00000308271 PPIGQ13427 754 aaKnown RBP eCLIP18.7■□□□□ 0.581e-6■■■□□ 15.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms