RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 TRBV5-3A0A0A0MS03 114 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 MYO1DO94832 1006 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 IGHV4-34P06331 123 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 MTHFD1P11586 935 aaKnown RBP11.42□□□□□ -0.58
TRIM40-205ENST00000307859 HOXB9P17482 250 aaPredicted RBP11.42□□□□□ -0.58
TRIM40-205ENST00000307859 ATP6V1B2P21281 511 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 HTR1BP28222 390 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 TIA1P31483 386 aaKnown RBP eCLIP11.42□□□□□ -0.58
TRIM40-205ENST00000307859 S100A3P33764 101 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 RAB28P51157 221 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 CCR5P51681 352 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 ATXN3P54252 364 aaPredicted RBP11.42□□□□□ -0.58
TRIM40-205ENST00000307859 PHEXP78562 749 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 PRKCQQ04759 706 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 LIPEQ05469 1076 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 RPE65Q16518 533 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 CMPK2Q5EBM0 449 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 LRIF1Q5T3J3 769 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 ENPP7Q6UWV6 458 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 ABRAXAS1Q6UWZ7 409 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 SYT12Q8IV01 421 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 KRT78Q8N1N4 520 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 PQLC1Q8N2U9 271 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 C2orf73Q8N5S3 287 aaPredicted RBP11.42□□□□□ -0.58
TRIM40-205ENST00000307859 C1orf52Q8N6N3 182 aaKnown RBP11.42□□□□□ -0.58
TRIM40-205ENST00000307859 LINC01555Q8NAE3 123 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 OR2L8Q8NGY9 312 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 STARD8Q92502 1023 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 PPM1MQ96MI6 270 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 NRTNQ99748 197 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 TRIM8Q9BZR9 551 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 TRIM15Q9C019 465 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 PITHD1Q9GZP4 211 aaPredicted RBP11.42□□□□□ -0.58
TRIM40-205ENST00000307859 SERHLQ9NQF3 203 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 IMP3Q9NV31 184 aaKnown RBP11.42□□□□□ -0.58
TRIM40-205ENST00000307859 VAPAQ9P0L0 249 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 ACTR3BQ9P1U1 418 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 HEBP2Q9Y5Z4 205 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 HS3ST3A1Q9Y663 406 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 EML5Q05BV3 1969 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 A0A096LPI6 279 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 AQP12BA6NM10 295 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 PDZK1P1A8MUH7 402 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 DFNA5O60443 496 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 ERN1O75460 977 aaKnown RBP11.42□□□□□ -0.58
TRIM40-205ENST00000307859 STAMBPO95630 424 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 ADRB1P08588 477 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 HTR1EP28566 365 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 ASMTP46597 345 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 REEP5Q00765 189 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 MEF2AQ02078 507 aaPredicted RBP11.42□□□□□ -0.58
TRIM40-205ENST00000307859 SRSF11Q05519 484 aaKnown RBP11.42□□□□□ -0.58
TRIM40-205ENST00000307859 LRRC32Q14392 662 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 UGT8Q16880 541 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 KIAA0895LQ68EN5 471 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 TMIGD1Q6UXZ0 262 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 ARMCX6Q7L4S7 300 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 VN1R5Q7Z5H4 357 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 ABI3BPQ7Z7G0 1075 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 TMEM126BQ8IUX1 230 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 AQP12AQ8IXF9 295 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 MSRB3Q8IXL7 192 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 GOLM1Q8NBJ4 401 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 ZNF740Q8NDX6 193 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 OR4K1Q8NGD4 311 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 KCTD14Q9BQ13 255 aaPredicted RBP11.42□□□□□ -0.58
TRIM40-205ENST00000307859 PAIP1Q9H074 479 aaKnown RBP11.42□□□□□ -0.58
TRIM40-205ENST00000307859 RHBGQ9H310 441 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 NT5DC2Q9H857 520 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 RMND5AQ9H871 391 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 PRDM8Q9NQV8 689 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 SLC25A37Q9NYZ2 338 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 ADGRE2Q9UHX3 823 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 RIMS3Q9UJD0 308 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 PCOLCE2Q9UKZ9 415 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 MAPRE3Q9UPY8 281 aa11.42□□□□□ -0.58
TRIM40-205ENST00000307859 OR52A4PA6NMU1 304 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 PRAMEF26H0Y7S4 382 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 ARPC2O15144 300 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 CXCR2P25025 360 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 PSMB5P28074 263 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 PTPN6P29350 595 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 SERPINB1P30740 379 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 KIR3DL1P43629 444 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 SELPLGQ14242 412 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 MUM1Q2TAK8 710 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 SWT1Q5T5J6 900 aaKnown RBP11.41□□□□□ -0.58
TRIM40-205ENST00000307859 CAMKMTQ7Z624 323 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 GPR180Q86V85 440 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 KBTBD2Q8IY47 623 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 PGBD3Q8N328 593 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 OR8J2Q8NGG1 315 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 OR52E1Q8NGJ3 308 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 DNAJC9Q8WXX5 260 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 SH3KBP1Q96B97 665 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 ITCHQ96J02 903 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 LRGUKQ96M69 825 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 AIF1LQ9BQI0 150 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 ACAT2Q9BWD1 397 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 C6orf106Q9H6K1 298 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms