RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 C4orf32Q8N8J7 132 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 OR4D6Q8NGJ1 314 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 NSUN5Q96P11 429 aaKnown RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 UCK2Q9BZX2 261 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 TAS2R3Q9NYW6 316 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 NWD1Q149M9 1564 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 USP31Q70CQ4 1352 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 PPRC1Q5VV67 1664 aaKnown RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 TRAFD1O14545 582 aaPredicted RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 HLA-EP13747 358 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 SSTR4P31391 388 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 PTGER1P34995 402 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 PREPP48147 710 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 TATDN1Q6P1N9 297 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 CYP4V2Q6ZWL3 525 aaPredicted RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 NXPE2Q96DL1 559 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 ATG5Q9H1Y0 275 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 C1orf109Q9NX04 203 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 MAN2B2Q9Y2E5 1009 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 ADGRB3O60242 1522 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 TEX13DA0A0J9YY54 714 aaPredicted RBP12.29□□□□□ -0.44
USP38-201ENST00000307017 M0R129 80 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 NDST3O95803 873 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 LIPCP11150 499 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 EDN3P14138 238 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 CASP7P55210 303 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 PRR5P85299 388 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 ZDHHC24Q6UX98 284 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 NUP54Q7Z3B4 507 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 UBE2Q1Q7Z7E8 422 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 PIAS4Q8N2W9 510 aaPredicted RBP12.29□□□□□ -0.44
USP38-201ENST00000307017 FAM83DQ9H4H8 585 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 CARNS1A5YM72 827 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 FAM171A2A8MVW0 826 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 ADH1AP07327 375 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 LSSP48449 732 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 RHBDL3P58872 404 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 ADAM15Q13444 863 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 GOLGA7Q7Z5G4 137 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 TCEANCQ8N8B7 351 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 ZNF516Q92618 1163 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 SAT2Q96F10 170 aaPredicted RBP12.29□□□□□ -0.44
USP38-201ENST00000307017 DPH2Q9BQC3 489 aaPredicted RBP12.29□□□□□ -0.44
USP38-201ENST00000307017 TNFRSF10DQ9UBN6 386 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 ERI3O43414 337 aaKnown RBP12.29□□□□□ -0.44
USP38-201ENST00000307017 GATBO75879 557 aaKnown RBP12.29□□□□□ -0.44
USP38-201ENST00000307017 SNAP29O95721 258 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 ADAP00813 363 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 ACTR3P61158 418 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 TBC1D25Q3MII6 688 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 LRRC38Q5VT99 294 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 DPY19L4Q7Z388 723 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 PCNPQ8WW12 178 aaKnown RBP12.29□□□□□ -0.44
USP38-201ENST00000307017 PRR11Q96HE9 360 aaPredicted RBP12.29□□□□□ -0.44
USP38-201ENST00000307017 GPR20Q99678 358 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 VNN1O95497 513 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 SLC35G6P0C7Q6 338 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 GSTT2BP0CG30 244 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 TPSB2P20231 275 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 IDSP22304 550 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 TPSAB1Q15661 275 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 PUS10Q3MIT2 529 aaKnown RBP12.29□□□□□ -0.44
USP38-201ENST00000307017 ASRGL1Q7L266 308 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 TMEM199Q8N511 208 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 ZNF717Q9BY31 904 aaPredicted RBP12.29□□□□□ -0.44
USP38-201ENST00000307017 TBC1D14Q9P2M4 693 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 A0A1B0GVG6 124 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 ASPAP45381 313 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 KHKP50053 298 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 SSX2Q16385 188 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 CNTD1Q8N815 330 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 OR4F6Q8NGB9 312 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 FBXL18Q96ME1 805 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 UROC1Q96N76 676 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 SSX3Q99909 188 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 SUCNR1Q9BXA5 334 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 PIK3C2BO00750 1634 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 TRBC2A0A5B9 178 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 LRRC10BA6NIK2 292 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 PBX1P40424 430 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 GRM5P41594 1212 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 CLCN2P51788 898 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 MLLT6P55198 1093 aaPredicted RBP12.29□□□□□ -0.44
USP38-201ENST00000307017 C22orf42Q6IC83 251 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 HSH2DQ96JZ2 352 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 ENAMQ9NRM1 1142 aa12.29□□□□□ -0.44
USP38-201ENST00000307017 FAM170BA6NMN3 283 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 MATN1P21941 496 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 SLC7A1P30825 629 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 HTR2BP41595 481 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 PER3P56645 1201 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 GRM2Q14416 872 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 PIGWQ7Z7B1 504 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 PDSS2Q86YH6 399 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 TMC8Q8IU68 726 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 SVOPLQ8N434 492 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 PHOSPHO1Q8TCT1 267 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 UPF1Q92900 1129 aaKnown RBP eCLIP12.28□□□□□ -0.44
USP38-201ENST00000307017 OR10A4Q9H209 315 aa12.28□□□□□ -0.44
USP38-201ENST00000307017 PTTG2Q9NZH5 202 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms