RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 PADI2Q9Y2J8 665 aa10.5□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PCDHGA4Q9Y5G9 962 aa10.5□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ACACBO00763 2458 aa10.5□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 IGF2RP11717 2491 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 KCNE1BA0A087WTH5 132 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 A0A1W2PPM1 405 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 URADA6NGE7 173 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 STX16-NPEPL1H3BU86 382 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 COPEO14579 308 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 STX16O14662 325 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 NDUFS4O43181 175 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 KLK8O60259 260 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CD63P08962 238 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 MTHFD2P13995 350 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 GSTM2P28161 218 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 EEF1DP29692 281 aaKnown RBP10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 AHRP35869 848 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 KCNC1P48547 511 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CCT5P48643 541 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 EMP3P54852 163 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 IRF8Q02556 426 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 VAC14Q08AM6 782 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 LAPTM5Q13571 262 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PCBP2Q15366 365 aaKnown RBP eCLIP10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 HKDC1Q2TB90 917 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 COL28A1Q2UY09 1125 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PRTGQ2VWP7 1150 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CCDC153Q494R4 210 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ARHGAP40Q5TG30 622 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 METTL2BQ6P1Q9 378 aaKnown RBP10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PRMT9Q6P2P2 845 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 FAM199XQ6PEV8 388 aaPredicted RBP10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 C19orf48Q6RUI8 117 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CROCCP2Q86T23 111 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 METTL27Q8N6F8 245 aaPredicted RBP10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SLC38A9Q8NBW4 561 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 TRPV3Q8NET8 790 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 OR4K1Q8NGD4 311 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SLC13A3Q8WWT9 602 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 STARD8Q92502 1023 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CCT6BQ92526 530 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 MVB12AQ96EY5 273 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PTCD3Q96EY7 689 aaKnown RBP10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 GBP5Q96PP8 586 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 RUFY1Q96T51 708 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 EFCAB11Q9BUY7 163 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SARGQ9BW04 601 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PITHD1Q9GZP4 211 aaPredicted RBP10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 DRC3Q9H069 523 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 EHD1Q9H4M9 534 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CPNE5Q9HCH3 593 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 RRAGDQ9NQL2 400 aaPredicted RBP10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 MID2Q9UJV3 735 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CDC14AQ9UNH5 594 aa10.49□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SCN2AQ99250 2005 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ASPMQ8IZT6 3477 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ANKDD1BA6NHY2 528 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 K7ENP7 123 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 RGS16O15492 202 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 P2RX6O15547 441 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 EFSO43281 561 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 STATHP02808 62 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 RAB40ALP0C0E4 278 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 KRT4P19013 534 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 FBLP22087 321 aaKnown RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 VARSP26640 1264 aaKnown RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PTPN4P29074 926 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 HPDP32754 393 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SCTRP47872 440 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 AVPR1BP47901 424 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SKP1P63208 163 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CYP4F2P78329 520 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PHEXP78562 749 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CHIT1Q13231 466 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SRSF6Q13247 344 aaKnown RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 GTF2H2Q13888 395 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 COL9A2Q14055 689 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SLC9A5Q14940 896 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 NCF4Q15080 339 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 NKAIN1Q4KMZ8 207 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 MLIPQ5VWP3 458 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ZNF385CQ66K41 422 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 GTF2H2CQ6P1K8 395 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 INO80CQ6PI98 192 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 FAM198BQ6UWH4 519 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 TMIGD1Q6UXZ0 262 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SLCO4C1Q6ZQN7 724 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 MYLK4Q86YV6 388 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SLC22A9Q8IVM8 553 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SRRM1Q8IYB3 904 aaKnown RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 CYP4X1Q8N118 509 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 C4orf33Q8N1A6 199 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ENDOVQ8N8Q3 282 aaKnown RBP10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ZCCHC10Q8TBK6 192 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 PPP4R1Q8TF05 950 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 UBE2E3Q969T4 207 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 ATP6V1E2Q96A05 226 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 COL26A1Q96A83 441 aa10.48□□□□□ -0.73
CSPG4P2Y-201ENST00000306853 FKBP10Q96AY3 582 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms