RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 TMIEQ8NEW7 156 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 ING5Q8WYH8 240 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 CYP2S1Q96SQ9 504 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 WRAP53Q9BUR4 548 aaKnown RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 BTBD1Q9H0C5 482 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 KCNK13Q9HB14 408 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 TAS2R9Q9NYW1 312 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 A8MV72 311 aaPredicted RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 L7N2F9 121 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 DDX6P26196 483 aaKnown RBP eCLIP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 DGKGP49619 791 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 RPL6Q02878 288 aaKnown RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 SCRN3Q0VDG4 424 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 DSG2Q14126 1118 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 CHRNA6Q15825 494 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 ARL9Q6T311 187 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 SLC36A4Q6YBV0 504 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 THOC6Q86W42 341 aaKnown RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 CEP97Q8IW35 865 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 TTLQ8NG68 377 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 ZNF514Q96K75 400 aaPredicted RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 CPNE5Q9HCH3 593 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 MAB21L2Q9Y586 359 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 SLC1A7O00341 560 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 CSF2P04141 144 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 ALPIP09923 528 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 F8A1P23610 371 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 CSKP41240 450 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 GRK6P43250 576 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 AGTR2P50052 363 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 CDH11P55287 796 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 XKR4Q5GH76 650 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 BORAQ6PGQ7 559 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 EFHD2Q96C19 240 aaPredicted RBP12.48□□□□□ -0.41
COL3A1-201ENST00000304636 PCDHGA7Q9Y5G6 932 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 CPQQ9Y646 472 aa12.48□□□□□ -0.41
COL3A1-201ENST00000304636 TEX46H3BTG2 121 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 WNT9AO14904 365 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 TBX18O95935 607 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 TACSTD2P09758 323 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 HK1P19367 917 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 RPP38P78345 283 aaKnown RBP12.47□□□□□ -0.41
COL3A1-201ENST00000304636 ZNF782Q6ZMW2 699 aaPredicted RBP12.47□□□□□ -0.41
COL3A1-201ENST00000304636 IQCHQ86VS3 1027 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 OSTM1Q86WC4 334 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 COX18Q8N8Q8 333 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 INO80EQ8NBZ0 244 aaPredicted RBP12.47□□□□□ -0.41
COL3A1-201ENST00000304636 NR4A3Q92570 626 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 SMOQ99835 787 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 CCDC32Q9BV29 185 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 FKBP14Q9NWM8 211 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 H3BMQ9 156 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 CNTN5O94779 1100 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 PTTG1O95997 202 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 LCN1P31025 176 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 AP2S1P53680 142 aaPredicted RBP12.47□□□□□ -0.41
COL3A1-201ENST00000304636 SHQ1Q6PI26 577 aaKnown RBP12.47□□□□□ -0.41
COL3A1-201ENST00000304636 CEACAM20Q6UY09 585 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 PLCZ1Q86YW0 608 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 FATE1Q969F0 183 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 COG8Q96MW5 612 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 RANBP9Q96S59 729 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 FUZQ9BT04 418 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 ENAMQ9NRM1 1142 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL3A1-201ENST00000304636 DNAJC27Q9NZQ0 273 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 FAM170BA6NMN3 283 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 AGR2O95994 175 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 RB1P06400 928 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 GALNT1Q10472 559 aaPredicted RBP12.47□□□□□ -0.41
COL3A1-201ENST00000304636 SP140Q13342 867 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 SIAH1Q8IUQ4 282 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 ZDHHC14Q8IZN3 488 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 NEUROD4Q9HD90 331 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 SCML2Q9UQR0 700 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 RELAQ04206 551 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 ARHGAP1Q07960 439 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 ADGRF1Q5T601 910 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 ALDH16A1Q8IZ83 802 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 TMIGD2Q96BF3 282 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 RPL10LQ96L21 214 aaKnown RBP12.47□□□□□ -0.41
COL3A1-201ENST00000304636 NSUN5Q96P11 429 aaKnown RBP12.47□□□□□ -0.41
COL3A1-201ENST00000304636 DHRS4Q9BTZ2 278 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 C14orf119Q9NWQ9 140 aa12.47□□□□□ -0.41
COL3A1-201ENST00000304636 A0A075B6Q4 140 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 HCRTO43612 131 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 DUSP11O75319 330 aaKnown RBP12.46□□□□□ -0.41
COL3A1-201ENST00000304636 KLK1P06870 262 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 CCR8P51685 355 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 CCL23P55773 120 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 C1QTNF8P60827 252 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 MS4A2Q01362 244 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 OR13J1Q8NGT2 312 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 SLC22A17Q8WUG5 538 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 NPLQ9BXD5 320 aaPredicted RBP12.46□□□□□ -0.41
COL3A1-201ENST00000304636 SUV39H2Q9H5I1 410 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 CYTH4Q9UIA0 394 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 MEMO1Q9Y316 297 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 MYH2Q9UKX2 1941 aa12.46□□□□□ -0.41
COL3A1-201ENST00000304636 G3V2L1 256 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms