RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 UNC80Q8N2C7 3258 aa12.46□□□□□ -0.42
HIF3A-204ENST00000300862 GABRR3A8MPY1 467 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 EIF3FO00303 357 aaPredicted RBP12.45□□□□□ -0.42
HIF3A-204ENST00000300862 KPNA4O00629 521 aaPredicted RBP12.45□□□□□ -0.42
HIF3A-204ENST00000300862 NDUFS2O75306 463 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 RFPL2O75678 378 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 FGF18O76093 207 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 ACRP10323 421 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 GPX2P18283 190 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 TNFRSF1BP20333 461 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 TRPC1P48995 793 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 GABARAPL2P60520 117 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 SYTL3Q4VX76 610 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 PERM1Q5SV97 790 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 ANGPTL8Q6UXH0 198 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 RAVER1Q8IY67 606 aaKnown RBP12.45□□□□□ -0.42
HIF3A-204ENST00000300862 CADM3Q8N126 398 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 RASGEF1AQ8N9B8 481 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 ATG16L2Q8NAA4 619 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 FAR1Q8WVX9 515 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 TRIT1Q9H3H1 467 aaKnown RBP12.45□□□□□ -0.42
HIF3A-204ENST00000300862 ATAD3AQ9NVI7 634 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 STOX2Q9P2F5 926 aaPredicted RBP12.45□□□□□ -0.42
HIF3A-204ENST00000300862 GMPPBQ9Y5P6 360 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 CLDN25C9JDP6 229 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 SAP18O00422 153 aaKnown RBP12.45□□□□□ -0.42
HIF3A-204ENST00000300862 CTSLP07711 333 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 IL1RNP18510 177 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 CD6P30203 668 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 HOXA9P31269 272 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 RYKP34925 604 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 ARHGDIAP52565 204 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 CRYBA2P53672 197 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 POLR2LP62875 67 aaKnown RBP12.45□□□□□ -0.42
HIF3A-204ENST00000300862 RAE1P78406 368 aaKnown RBP12.45□□□□□ -0.42
HIF3A-204ENST00000300862 IFITM3Q01628 133 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 SRSF11Q05519 484 aaKnown RBP12.45□□□□□ -0.42
HIF3A-204ENST00000300862 SP140Q13342 867 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 GAB1Q13480 694 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 NPTX1Q15818 432 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 CTF1Q16619 201 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 LY6G5CQ5SRR4 150 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 TTC23LQ6PF05 361 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 Q6ZPB1 254 aaPredicted RBP12.45□□□□□ -0.42
HIF3A-204ENST00000300862 ANKRD33Q7Z3H0 272 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 FAM9CQ8IZT9 166 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 TTC29Q8NA56 475 aaPredicted RBP12.45□□□□□ -0.42
HIF3A-204ENST00000300862 KREMEN2Q8NCW0 462 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 DUSP26Q9BV47 211 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 EMILIN2Q9BXX0 1053 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 RC3H2Q9HBD1 1191 aaKnown RBP12.45□□□□□ -0.42
HIF3A-204ENST00000300862 TM9SF3Q9HD45 589 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 AKIP1Q9NQ31 210 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 ASAH2Q9NR71 780 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 SH3BP4Q9P0V3 963 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 KIF17Q9P2E2 1029 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 ITGB1BP2Q9UKP3 347 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 FZD4Q9ULV1 537 aa12.45□□□□□ -0.42
HIF3A-204ENST00000300862 GPC6Q9Y625 555 aaPredicted RBP12.45□□□□□ -0.42
HIF3A-204ENST00000300862 ZNF99A8MXY4 864 aaPredicted RBP12.44□□□□□ -0.42
HIF3A-204ENST00000300862 SLCO2B1O94956 709 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 CXCL14O95715 111 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 OPN1SWP03999 348 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 ANXA4P09525 319 aaPredicted RBP12.44□□□□□ -0.42
HIF3A-204ENST00000300862 ITGAMP11215 1152 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 ACPPP15309 386 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 CSF2RAP15509 400 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 TIMP2P16035 220 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 ZNF24P17028 368 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 ITGB8P26012 769 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 VIPR1P32241 457 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 TOP3AQ13472 1001 aaPredicted RBP12.44□□□□□ -0.42
HIF3A-204ENST00000300862 TEAD2Q15562 447 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 RFX4Q33E94 735 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.44□□□□□ -0.42
HIF3A-204ENST00000300862 LIPJQ5W064 366 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 KDM4DQ6B0I6 523 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 CCDC71Q8IV32 467 aaPredicted RBP12.44□□□□□ -0.42
HIF3A-204ENST00000300862 OR4K1Q8NGD4 311 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 TMEM159Q96B96 161 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 SACM1LQ9NTJ5 587 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 TMEM39AQ9NV64 488 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 SPATA6Q9NWH7 488 aaPredicted RBP12.44□□□□□ -0.42
HIF3A-204ENST00000300862 RAPGEFL1Q9UHV5 662 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 ENPP5Q9UJA9 477 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 PCDHGA10Q9Y5H3 936 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 DENND4CQ5VZ89 1909 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 GNG14A0A1W2PPG7 69 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 SLC16A5O15375 505 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 FADS2O95864 444 aaKnown RBP12.44□□□□□ -0.42
HIF3A-204ENST00000300862 GSTM1P09488 218 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 CCDC159P0C7I6 412 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 CTSAP10619 480 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 ITIH1P19827 911 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 DNAJA1P31689 397 aaKnown RBP12.44□□□□□ -0.42
HIF3A-204ENST00000300862 ZNF846Q147U1 533 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 GRIN2CQ14957 1233 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 HUS1BQ8NHY5 278 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 CLP1Q92989 425 aaKnown RBP12.44□□□□□ -0.42
HIF3A-204ENST00000300862 PKP4Q99569 1192 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms