RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 EPS8Q12929 822 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 ZXDCQ2QGD7 858 aaPredicted RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 HIPK1Q86Z02 1210 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 OR2AP1Q8NGE2 309 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 MAL2Q969L2 176 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 CCDC115Q96NT0 180 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 CPPED1Q9BRF8 314 aaPredicted RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 ZNF717Q9BY31 904 aaPredicted RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 KCNH6Q9H252 994 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 ELAC1Q9H777 363 aaKnown RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 HMX1Q9NP08 348 aaPredicted RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 THG1LQ9NWX6 298 aaKnown RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 TEKT2Q9UIF3 430 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 A0A0X1KG70 313 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 FAM20BO75063 409 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 EPORP19235 508 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 RPS3P23396 243 aaKnown RBP eCLIP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 GRSF1Q12849 480 aaKnown RBP eCLIP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 CYP27C1Q4G0S4 372 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 STEAP3Q658P3 488 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 ATG9BQ674R7 924 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 NOXRED1Q6NXP6 359 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 ZNF551Q7Z340 670 aaPredicted RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 NLGN4XQ8N0W4 816 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 OR52J3Q8NH60 311 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 ALG14Q96F25 216 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 REXO5Q96IC2 774 aaKnown RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 SERHLQ9NQF3 203 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 PAQR5Q9NXK6 330 aaPredicted RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 SCN3BQ9NY72 215 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 ZDHHC3Q9NYG2 299 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 GRXCR2A6NFK2 248 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 CENPXA8MT69 81 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 ZNF99A8MXY4 864 aaPredicted RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 RGS13O14921 159 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 EPN2O95208 641 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 NUDT7P0C024 238 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 CBLP22681 906 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 CTF1Q16619 201 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 PLEKHG6Q3KR16 790 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 FRG2Q64ET8 278 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 OR2T5Q6IEZ7 315 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 MACC1Q6ZN28 852 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 Q6ZPB1 254 aaPredicted RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 TTC29Q8NA56 475 aaPredicted RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 OR2T29Q8NH02 315 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 MED30Q96HR3 178 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 FRG2BQ96QU4 278 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 ASPSCR1Q9BZE9 553 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 MRPL17Q9NRX2 175 aaKnown RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 SRRDQ9UH36 339 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 INTS6Q9UL03 887 aaKnown RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 A0A1W2PRU2 124 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 DYRK3O43781 588 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 TSC22D2O75157 780 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 HPRP00739 348 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 OPN1SWP03999 348 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 TNFRSF1BP20333 461 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 LHCGRP22888 699 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 VLDLRP98155 873 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 B4GALNT1Q00973 533 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 PTSQ03393 145 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 GPR33Q49SQ1 333 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 ADNP2Q6IQ32 1131 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 LAIR2Q6ISS4 152 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 DPY19L3Q6ZPD9 716 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 Q6ZVU0 165 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 USP45Q70EL2 814 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 AHSA2Q719I0 299 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 GLRX5Q86SX6 157 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 SPPL2AQ8TCT8 520 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 MRPS31Q92665 395 aaKnown RBP13□□□□□ -0.33
CTDP1-202ENST00000299543 USP7Q93009 1102 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 SH3KBP1Q96B97 665 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 SUV39H2Q9H5I1 410 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 TMEFF2Q9UIK5 374 aaPredicted RBP13□□□□□ -0.33
CTDP1-202ENST00000299543 A0A096LPI6 279 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 SCO2O43819 266 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 ITIH1P19827 911 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 GP2P55259 537 aaKnown RBP13□□□□□ -0.33
CTDP1-202ENST00000299543 SNRPD1P62314 119 aaKnown RBP13□□□□□ -0.33
CTDP1-202ENST00000299543 ACSM2AQ08AH3 577 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 ABHD18Q0P651 414 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 NAE1Q13564 534 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 SYT16Q17RD7 645 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 ZFP69Q49AA0 526 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 CDONQ4KMG0 1287 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 ATAD3CQ5T2N8 411 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 NXNL2Q5VZ03 156 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 CPZQ66K79 652 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 ACSM2BQ68CK6 577 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 GPR153Q6NV75 609 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 TMEM150AQ86TG1 271 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 CHST14Q8NCH0 376 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 PIK3C3Q8NEB9 887 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 ADAMTS19Q8TE59 1207 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 VPS35Q96QK1 796 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 KRT84Q9NSB2 600 aa13□□□□□ -0.33
CTDP1-202ENST00000299543 B4GALT6Q9UBX8 382 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms