RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 A0A0J9YY10 115 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 CCDC189A1A4V9 331 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 OR2A25A4D2G3 310 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 SLC9B1P1A6NJY1 282 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 A8MU76 341 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 C2orf74A8MZ97 194 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 ISM1B1AKI9 464 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 H3BMH7 237 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 PPP6CO00743 305 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 COPEO14579 308 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 HAT1O14929 419 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 RGS16O15492 202 aaPredicted RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 CTSVO60911 334 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 GLRA3O75311 464 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 RPS17P08708 135 aaKnown RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 ANXA5P08758 320 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 ANKRD34CP0C6C1 535 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 DHRS4L1P0CG22 281 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 CDH1P12830 882 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 CCL4P13236 92 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 HGFP14210 728 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 CD22P20273 847 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 MAGP20916 626 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 SDHBP21912 280 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 MAP4P27816 1152 aaKnown RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 ARRB2P32121 409 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 NTF4P34130 210 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 RPA3P35244 121 aaPredicted RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 GRIA3P42263 894 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 GATA4P43694 442 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 CCR10P46092 362 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 SEPHS1P49903 392 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 NFKB2Q00653 900 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 MEF2AQ02078 507 aaPredicted RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 TARDBPQ13148 414 aaKnown RBP eCLIP5.66□□□□□ -1.5
SSX3-201ENST00000298396 BIRC2Q13490 618 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 COL9A2Q14055 689 aaPredicted RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 PCLAFQ15004 111 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 CLPPQ16740 277 aaPredicted RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 PFKFB4Q16877 469 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 SLC5A12Q1EHB4 618 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 UNC50Q53HI1 259 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 CDKL4Q5MAI5 379 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 AGBL2Q5U5Z8 902 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 CACHD1Q5VU97 1274 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 PRAMEF13Q5VWM6 474 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 ICE2Q659A1 982 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 SULT1C3Q6IMI6 304 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 ZNF425Q6IV72 752 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 FIGLAQ6QHK4 219 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 LCTLQ6UWM7 567 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 HDXQ7Z353 690 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 THOC6Q86W42 341 aaKnown RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 PAQR7Q86WK9 346 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 PLXDC1Q8IUK5 500 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 D2HGDHQ8N465 521 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 PTGR2Q8N8N7 351 aaPredicted RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 ZNF740Q8NDX6 193 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 STAG3L4Q8TBR4 150 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 MAGEC3Q8TD91 643 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 TCP10LQ8TDR4 215 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 NEIL2Q969S2 332 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 PHF21BQ96EK2 531 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 RNF31Q96EP0 1072 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 MED8Q96G25 268 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 LIN37Q96GY3 246 aaPredicted RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 AHCYL2Q96HN2 611 aaKnown RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 SCYL1Q96KG9 808 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 TSNARE1Q96NA8 513 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 FAM111AQ96PZ2 611 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 TMEM237Q96Q45 408 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 SPOCK3Q9BQ16 436 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 MECRQ9BV79 373 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 RAB11FIP5Q9BXF6 653 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 AICDAQ9GZX7 198 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 CENPHQ9H3R5 247 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 ZBTB26Q9HCK0 441 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 SSU72Q9NP77 194 aaKnown RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 TNFRSF12AQ9NP84 129 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 CCDC177Q9NQR7 707 aaPredicted RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 ABCF3Q9NUQ8 709 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 ARGLU1Q9NWB6 273 aaPredicted RBP5.66□□□□□ -1.5
SSX3-201ENST00000298396 OCIAD1Q9NX40 245 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 CD274Q9NZQ7 290 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 TAC3Q9UHF0 121 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 ZNF225Q9UK10 706 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 PILRAQ9UKJ1 303 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 PCTPQ9UKL6 214 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 SLC22A14Q9Y267 594 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 BTRCQ9Y297 605 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 USP24Q9UPU5 2620 aa5.66□□□□□ -1.5
SSX3-201ENST00000298396 MED19A0JLT2 244 aaPredicted RBP5.65□□□□□ -1.5
SSX3-201ENST00000298396 E7EQ34 232 aa5.65□□□□□ -1.5
SSX3-201ENST00000298396 H3BQF6 201 aa5.65□□□□□ -1.5
SSX3-201ENST00000298396 E2F3O00716 465 aa5.65□□□□□ -1.5
SSX3-201ENST00000298396 OR7A17O14581 309 aa5.65□□□□□ -1.5
SSX3-201ENST00000298396 P2RX6O15547 441 aa5.65□□□□□ -1.5
SSX3-201ENST00000298396 PRPF4O43172 522 aaKnown RBP eCLIP5.65□□□□□ -1.5
SSX3-201ENST00000298396 LCMT2O60294 686 aaKnown RBP5.65□□□□□ -1.5
SSX3-201ENST00000298396 STK16O75716 305 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms