RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 TSC22D4Q9Y3Q8 395 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 OR52A4PA6NMU1 304 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 ENO4A6NNW6 628 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 C10orf142B7Z368 130 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 SH3BGRLO75368 114 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 LRATO95237 230 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 PIK3CBP42338 1070 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 RAB28P51157 221 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 TPRG1LQ5T0D9 272 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 TMIGD1Q6UXZ0 262 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 CYP2R1Q6VVX0 501 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 OR8J3Q8NGG0 315 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 TRIM15Q9C019 465 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 MUC13Q9H3R2 512 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 NEUROG3Q9Y4Z2 214 aa13.72□□□□□ -0.21
C9orf3-202ENST00000297979 A0A1W2PPV9 198 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 CHURC1-FNTBB4DL54 471 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 NDUFB5O43674 189 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 YPEL5P62699 121 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 RAE1P78406 368 aaKnown RBP13.71□□□□□ -0.21
C9orf3-202ENST00000297979 RHDQ02161 417 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 RPE65Q16518 533 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 DPY19L1Q2PZI1 675 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 PGS1Q32NB8 556 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 ANO7Q6IWH7 933 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 TMEM151BQ8IW70 566 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 ZNF687Q8N1G0 1237 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 PQLC1Q8N2U9 271 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 SYNPOQ8N3V7 929 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 LINC01555Q8NAE3 123 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 GPR156Q8NFN8 814 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 DNAJB8Q8NHS0 232 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 GFM2Q969S9 779 aaKnown RBP13.71□□□□□ -0.21
C9orf3-202ENST00000297979 ZUFSPQ96AP4 578 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 HHIPQ96QV1 700 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 C6orf106Q9H6K1 298 aaPredicted RBP13.71□□□□□ -0.21
C9orf3-202ENST00000297979 RMND5AQ9H871 391 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 WASH6PQ9NQA3 447 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 CYP8B1Q9UNU6 501 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 LRRC42Q9Y546 428 aa13.71□□□□□ -0.21
C9orf3-202ENST00000297979 TCRBV3S1A0A5B6 114 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 PRSS47A8MTI9 375 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 TNFRSF10CO14798 259 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 MTHFD1P11586 935 aaKnown RBP13.71□□□□□ -0.22
C9orf3-202ENST00000297979 ATP6V1B2P21281 511 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 PSMB5P28074 263 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 PKLRP30613 574 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 TIA1P31483 386 aaKnown RBP eCLIP13.71□□□□□ -0.22
C9orf3-202ENST00000297979 LRRC32Q14392 662 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 SF1Q15637 639 aaKnown RBP13.71□□□□□ -0.22
C9orf3-202ENST00000297979 MSANTD1Q6ZTZ1 278 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 RD3Q7Z3Z2 195 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 IFNEQ86WN2 208 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 TMEM145Q8NBT3 493 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 ZNF740Q8NDX6 193 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 MIPOL1Q8TD10 442 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 NELL1Q92832 810 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 CDX2Q99626 313 aaPredicted RBP13.71□□□□□ -0.22
C9orf3-202ENST00000297979 AIF1LQ9BQI0 150 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 LMAN1LQ9HAT1 526 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 QPCTLQ9NXS2 382 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 VAPAQ9P0L0 249 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 EGFL7Q9UHF1 273 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 MAN2B2Q9Y2E5 1009 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 HEBP2Q9Y5Z4 205 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 HS3ST3A1Q9Y663 406 aa13.71□□□□□ -0.22
C9orf3-202ENST00000297979 PRSS51A0A1B0GVH4 220 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 AKAP10O43572 662 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 DFNA5O60443 496 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 CXCR2P25025 360 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 ASMTP46597 345 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 RGS19P49795 217 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 C21orf58P58505 322 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 MTPNP58546 118 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 PHC1P78364 1004 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 PRKCQQ04759 706 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 TAF11Q15544 211 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 KIAA0895LQ68EN5 471 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 LCN8Q6JVE9 175 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 NANOGNBQ7Z5D8 188 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 ARHGAP22Q7Z5H3 698 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 GPR180Q86V85 440 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 ABHD11Q8NFV4 315 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 OR2L8Q8NGY9 312 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 DNAJC9Q8WXX5 260 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 STARD8Q92502 1023 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 TSACCQ96A04 125 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-202ENST00000297979 TOE1Q96GM8 510 aaKnown RBP13.7□□□□□ -0.22
C9orf3-202ENST00000297979 ITCHQ96J02 903 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 CUEDC1Q9NWM3 386 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-202ENST00000297979 ACTR3BQ9P1U1 418 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-202ENST00000297979 A0A0B4J203 849 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 TOR1BO14657 336 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 ARPC2O15144 300 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 TGFB1P01137 390 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 IGHV4-34P06331 123 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 ANXA4P09525 319 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-202ENST00000297979 KIR3DL1P43629 444 aa13.7□□□□□ -0.22
C9orf3-202ENST00000297979 CCR5P51681 352 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms