RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 SCGB3A2Q96PL1 93 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 CLCC1Q96S66 551 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 A0A096LPI6 279 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 CNTN5O94779 1100 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 CSNK2A2P19784 350 aaPredicted RBP10.72□□□□□ -0.69
PBRM1-201ENST00000296302 GGT5P36269 586 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 CEBPGP53567 150 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 MLLT6P55198 1093 aaPredicted RBP10.72□□□□□ -0.69
PBRM1-201ENST00000296302 PSMA6P60900 246 aaKnown RBP10.72□□□□□ -0.69
PBRM1-201ENST00000296302 ST3GAL3Q11203 375 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 OLIG2Q13516 323 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 TOMM20Q15388 145 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 SCAMP5Q8TAC9 235 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 KCNJ9Q92806 393 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 RFT1Q96AA3 541 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 PLEKHA1Q9HB21 404 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 NEUROD4Q9HD90 331 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 LYARQ9NX58 379 aaKnown RBP10.72□□□□□ -0.69
PBRM1-201ENST00000296302 MED31Q9Y3C7 131 aa10.72□□□□□ -0.69
PBRM1-201ENST00000296302 LRRN3E7EW58 273 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 CLDN4O14493 209 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 FOXD2O60548 495 aaPredicted RBP10.71□□□□□ -0.69
PBRM1-201ENST00000296302 BCHEP06276 602 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 FUT4P22083 530 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 CD40LGP29965 261 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 LEPRP48357 1165 aaKnown RBP10.71□□□□□ -0.69
PBRM1-201ENST00000296302 PLA2G16P53816 162 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 UBXN11Q5T124 520 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 BORAQ6PGQ7 559 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 TMEM17Q86X19 198 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 PM20D2Q8IYS1 436 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 PIAS4Q8N2W9 510 aaPredicted RBP10.71□□□□□ -0.69
PBRM1-201ENST00000296302 OR10Q1Q8NGQ4 319 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 ACDQ96AP0 544 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 LRRN3Q9H3W5 708 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 MAGIXQ9H6Y5 334 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 AIG1Q9NVV5 245 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 DNAJC27Q9NZQ0 273 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 SNED1Q8TER0 1413 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 PPEF2O14830 753 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 PRMT3O60678 531 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 KRT33AO76009 404 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 DHRS4L1P0CG22 281 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 OR3A3P47888 321 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 OR3A2P47893 321 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 RABGGTBP53611 331 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 PMS2P3Q13401 168 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 LAPTM4AQ15012 233 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 VARS2Q5ST30 1063 aaKnown RBP10.71□□□□□ -0.69
PBRM1-201ENST00000296302 C10orf62Q5T681 223 aaPredicted RBP10.71□□□□□ -0.69
PBRM1-201ENST00000296302 FBXL22Q6P050 247 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 OR2L5Q8NG80 312 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 OR5AK3PQ8NH89 298 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 PTPN18Q99952 460 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 PPIEQ9UNP9 301 aaKnown RBP10.71□□□□□ -0.69
PBRM1-201ENST00000296302 CDH10Q9Y6N8 788 aa10.71□□□□□ -0.69
PBRM1-201ENST00000296302 ATRNL1Q5VV63 1379 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 ZSCAN5BA6NJL1 495 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 SLC1A7O00341 560 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 RENP00797 406 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 EPOP01588 193 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 RB1P06400 928 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 EDNRAP25101 427 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 S100A2P29034 98 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 RPP38P78345 283 aaKnown RBP10.71□□□□□ -0.7
PBRM1-201ENST00000296302 BLOC1S3Q6QNY0 202 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 OR2L3Q8NG85 312 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 MYRFLQ96LU7 910 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 RAB11FIP5Q9BXF6 653 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 ARMC1Q9NVT9 282 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 C14orf119Q9NWQ9 140 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 SLC22A14Q9Y267 594 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 WNT9AO14904 365 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 RP2O75695 350 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 ZNF823P16415 610 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 MAGEA12P43365 314 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 C1QTNF8P60827 252 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 LRRC66Q68CR7 880 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 PNCKQ6P2M8 343 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 CEACAM20Q6UY09 585 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 SNX29P2Q8IUI4 249 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 TCEANCQ8N8B7 351 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 ABHD11Q8NFV4 315 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 OR13J1Q8NGT2 312 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 PEX13Q92968 403 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 FCRL3Q96P31 734 aaPredicted RBP10.71□□□□□ -0.7
PBRM1-201ENST00000296302 CD244Q9BZW8 370 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 SMOC2Q9H3U7 446 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 TAS2R10Q9NYW0 307 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 IFT52Q9Y366 437 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 PCDHGB5Q9Y5G0 923 aa10.71□□□□□ -0.7
PBRM1-201ENST00000296302 OR1I1O60431 355 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 MAP3K8P41279 467 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 INHBEP58166 350 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 PIGFQ07326 219 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 NIPAL4Q0D2K0 466 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 FAM76BQ5HYJ3 339 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 TMEM135Q86UB9 458 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 ZSWIM9Q86XI8 627 aa10.7□□□□□ -0.7
PBRM1-201ENST00000296302 GHDCQ8N2G8 530 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms