RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 GNB5O14775 395 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 TRAPPC6AO75865 159 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 SEC24AO95486 1093 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 CCT3P49368 545 aaKnown RBP17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 EMX2Q04743 252 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 KCTD21Q4G0X4 260 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZNF648Q5T619 568 aaPredicted RBP17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 RNF31Q96EP0 1072 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 PRODH2Q9UF12 536 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 KIAA0100Q14667 2235 aaKnown RBP17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 AGPSO00116 658 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 BTN3A3O00478 584 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 KLF11O14901 512 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 AXIN1O15169 862 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 ITM2AO43736 263 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 MLLT1Q03111 559 aaPredicted RBP17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 MZT2BQ6NZ67 158 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 ATXN10Q9UBB4 475 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 PRSS51A0A1B0GVH4 220 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 RPL5P46777 297 aaKnown RBP17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 DNAJB13P59910 316 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 KIAA0319Q5VV43 1072 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 HIST1H2AAQ96QV6 131 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 CTPS2Q9NRF8 586 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZDHHC2Q9UIJ5 367 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 PSAT1Q9Y617 370 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 SETD1AO15047 1707 aaKnown RBP17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 ANXA8P13928 327 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 ACADLP28330 430 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 TARDBPQ13148 414 aaKnown RBP eCLIP17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZNF234Q14588 700 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 DDI2Q5TDH0 399 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 RHEBL1Q8TAI7 183 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 TSEN15Q8WW01 171 aaKnown RBP17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 PLGRKTQ9HBL7 147 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 OARD1Q9Y530 152 aa17.15■□□□□ 0.34
CDC42EP3-201ENST00000295324 MUSKO15146 869 aa17.14■□□□□ 0.34
CDC42EP3-201ENST00000295324 PCDHGA12O60330 932 aa17.14■□□□□ 0.34
CDC42EP3-201ENST00000295324 FADS2O95864 444 aaKnown RBP17.14■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZNF267Q14586 743 aaPredicted RBP17.14■□□□□ 0.34
CDC42EP3-201ENST00000295324 COLEC12Q5KU26 742 aa17.14■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZNF678Q5SXM1 525 aa17.14■□□□□ 0.34
CDC42EP3-201ENST00000295324 PTCHD1Q96NR3 888 aa17.14■□□□□ 0.34
CDC42EP3-201ENST00000295324 ZNF382Q96SR6 550 aa17.14■□□□□ 0.34
CDC42EP3-201ENST00000295324 FTSJ1Q9UET6 329 aa17.14■□□□□ 0.34
CDC42EP3-201ENST00000295324 FAM149AA5PLN7 773 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 KCNJ5P48544 419 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 ZSWIM7Q19AV6 140 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 FRRS1Q6ZNA5 592 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 NRROSQ86YC3 692 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 RELL1Q8IUW5 271 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 NPAS3Q8IXF0 933 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 NPWQ8N729 165 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 ZNF483Q8TF39 744 aaPredicted RBP17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 ZNF570Q96NI8 536 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 POLR2J3Q9H1A7 115 aaKnown RBP17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 DNAJB9Q9UBS3 223 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 RARRES3Q9UL19 164 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 TP73O15350 636 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 S1PR4O95977 384 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 HOXC13P31276 330 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 LSM3P62310 102 aaKnown RBP17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 CDK6Q00534 326 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 SMARCD3Q6STE5 483 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 IKBIPQ70UQ0 350 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 GPR65Q8IYL9 337 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 CHID1Q9BWS9 393 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 PSMD11O00231 422 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 RGS10O43665 173 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 SLC22A15Q8IZD6 547 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 LRRC58Q96CX6 371 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 NARS2Q96I59 477 aaKnown RBP17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 MED31Q9Y3C7 131 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 IRAK3Q9Y616 596 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 ZBTB42B2RXF5 422 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 PRAMEF26H0Y7S4 382 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 OR2B3O76000 313 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 BPIP17213 487 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 PSAPL1Q6NUJ1 521 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 CEACAM20Q6UY09 585 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 IQCHQ86VS3 1027 aa17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 PELOQ9BRX2 385 aaKnown RBP17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 FARSBQ9NSD9 589 aaKnown RBP17.14■□□□□ 0.33
CDC42EP3-201ENST00000295324 FHP07954 510 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 C8orf89P0DMQ9 161 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 POU2F1P14859 743 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 DGKQP52824 942 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 ADARP55265 1226 aaKnown RBP17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 CRTC1Q6UUV9 634 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 FRMD7Q6ZUT3 714 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 WDR60Q8WVS4 1066 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 HCN2Q9UL51 889 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 FAM92AA1XBS5 289 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 TP53I11O14683 189 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 CYB5AP00167 134 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 PGRP06401 933 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 DNASE1L1P49184 302 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 USP53Q70EK8 1073 aa17.13■□□□□ 0.33
CDC42EP3-201ENST00000295324 TMEM135Q86UB9 458 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms