RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 GCNT7Q6ZNI0 430 aa8.8□□□□□ -1
PDPN-201ENST00000294489 ANKRD46Q86W74 232 aa8.8□□□□□ -1
PDPN-201ENST00000294489 MSRB3Q8IXL7 192 aa8.8□□□□□ -1
PDPN-201ENST00000294489 C1orf52Q8N6N3 182 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 FIG4Q92562 907 aa8.8□□□□□ -1
PDPN-201ENST00000294489 FAM120BQ96EK7 910 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 BMFQ96LC9 184 aa8.8□□□□□ -1
PDPN-201ENST00000294489 RNF145Q96MT1 663 aa8.8□□□□□ -1
PDPN-201ENST00000294489 SEPHS2Q99611 448 aa8.8□□□□□ -1
PDPN-201ENST00000294489 PRPF18Q99633 342 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 HAUS8Q9BT25 410 aa8.8□□□□□ -1
PDPN-201ENST00000294489 KAT8Q9H7Z6 458 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 YY1AP1Q9H869 796 aa8.8□□□□□ -1
PDPN-201ENST00000294489 SERHLQ9NQF3 203 aa8.8□□□□□ -1
PDPN-201ENST00000294489 TDRKHQ9Y2W6 561 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 TRBV5-3A0A0A0MS03 114 aa8.8□□□□□ -1
PDPN-201ENST00000294489 SAC3D1A6NKF1 404 aa8.8□□□□□ -1
PDPN-201ENST00000294489 EVPLLA8MZ36 301 aa8.8□□□□□ -1
PDPN-201ENST00000294489 FOXE1O00358 373 aaPredicted RBP8.8□□□□□ -1
PDPN-201ENST00000294489 TNFRSF10CO14798 259 aa8.8□□□□□ -1
PDPN-201ENST00000294489 LDLRP01130 860 aa8.8□□□□□ -1
PDPN-201ENST00000294489 ANXA4P09525 319 aaPredicted RBP8.8□□□□□ -1
PDPN-201ENST00000294489 SLC35G4P0C7Q5 338 aa8.8□□□□□ -1
PDPN-201ENST00000294489 CKMT2P17540 419 aa8.8□□□□□ -1
PDPN-201ENST00000294489 ACSL1P33121 698 aa8.8□□□□□ -1
PDPN-201ENST00000294489 STARD6P59095 220 aa8.8□□□□□ -1
PDPN-201ENST00000294489 RPS13P62277 151 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 NFATC4Q14934 902 aa8.8□□□□□ -1
PDPN-201ENST00000294489 PRAMEF14Q5SWL7 426 aa8.8□□□□□ -1
PDPN-201ENST00000294489 C6orf52Q5T4I8 152 aa8.8□□□□□ -1
PDPN-201ENST00000294489 INTS11Q5TA45 600 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 PRAMEF13Q5VWM6 474 aa8.8□□□□□ -1
PDPN-201ENST00000294489 NXPE4Q6UWF7 544 aa8.8□□□□□ -1
PDPN-201ENST00000294489 WASH2PQ6VEQ5 465 aa8.8□□□□□ -1
PDPN-201ENST00000294489 ZNF852Q6ZMS4 543 aa8.8□□□□□ -1
PDPN-201ENST00000294489 TMEM145Q8NBT3 493 aa8.8□□□□□ -1
PDPN-201ENST00000294489 ZNF548Q8NEK5 533 aaPredicted RBP8.8□□□□□ -1
PDPN-201ENST00000294489 VPS37AQ8NEZ2 397 aa8.8□□□□□ -1
PDPN-201ENST00000294489 OR8J2Q8NGG1 315 aa8.8□□□□□ -1
PDPN-201ENST00000294489 OR5AR1Q8NGP9 310 aa8.8□□□□□ -1
PDPN-201ENST00000294489 POP5Q969H6 163 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 CNBD2Q96M20 576 aa8.8□□□□□ -1
PDPN-201ENST00000294489 PANX1Q96RD7 426 aa8.8□□□□□ -1
PDPN-201ENST00000294489 UGT2B28Q9BY64 529 aa8.8□□□□□ -1
PDPN-201ENST00000294489 REXO4Q9GZR2 422 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 WASH6PQ9NQA3 447 aa8.8□□□□□ -1
PDPN-201ENST00000294489 FAM120CQ9NX05 1096 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 RNF103-CHMP3A0A140T963 221 aa8.8□□□□□ -1
PDPN-201ENST00000294489 GNG14A0A1W2PPG7 69 aa8.8□□□□□ -1
PDPN-201ENST00000294489 PIPSLA2A3N6 862 aa8.8□□□□□ -1
PDPN-201ENST00000294489 FAM149AA5PLN7 773 aa8.8□□□□□ -1
PDPN-201ENST00000294489 PRR23AA6NEV1 266 aa8.8□□□□□ -1
PDPN-201ENST00000294489 LRRC72A6NJI9 287 aa8.8□□□□□ -1
PDPN-201ENST00000294489 CACNB4O00305 520 aaPredicted RBP8.8□□□□□ -1
PDPN-201ENST00000294489 SCELO95171 688 aa8.8□□□□□ -1
PDPN-201ENST00000294489 PIM1P11309 404 aaPredicted RBP8.8□□□□□ -1
PDPN-201ENST00000294489 HNRNPA2B1P22626 353 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 YPEL5P62699 121 aa8.8□□□□□ -1
PDPN-201ENST00000294489 CHRNB3Q05901 458 aa8.8□□□□□ -1
PDPN-201ENST00000294489 DUOXA1Q1HG43 343 aa8.8□□□□□ -1
PDPN-201ENST00000294489 GTDC1Q4AE62 458 aa8.8□□□□□ -1
PDPN-201ENST00000294489 TMTC4Q5T4D3 741 aa8.8□□□□□ -1
PDPN-201ENST00000294489 RAB42Q8N4Z0 105 aa8.8□□□□□ -1
PDPN-201ENST00000294489 PHC3Q8NDX5 983 aa8.8□□□□□ -1
PDPN-201ENST00000294489 FAM110BQ8TC76 370 aa8.8□□□□□ -1
PDPN-201ENST00000294489 CHTF18Q8WVB6 975 aa8.8□□□□□ -1
PDPN-201ENST00000294489 GUCD1Q96NT3 240 aa8.8□□□□□ -1
PDPN-201ENST00000294489 SLC29A1Q99808 456 aa8.8□□□□□ -1
PDPN-201ENST00000294489 INPP5KQ9BT40 448 aa8.8□□□□□ -1
PDPN-201ENST00000294489 TBCDQ9BTW9 1192 aa8.8□□□□□ -1
PDPN-201ENST00000294489 BDH2Q9BUT1 245 aa8.8□□□□□ -1
PDPN-201ENST00000294489 CHID1Q9BWS9 393 aa8.8□□□□□ -1
PDPN-201ENST00000294489 TRIT1Q9H3H1 467 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 IKZF5Q9H5V7 419 aa8.8□□□□□ -1
PDPN-201ENST00000294489 CXorf56Q9H5V9 222 aa8.8□□□□□ -1
PDPN-201ENST00000294489 GEMIN8Q9NWZ8 242 aaKnown RBP8.8□□□□□ -1
PDPN-201ENST00000294489 PCOLCE2Q9UKZ9 415 aa8.8□□□□□ -1
PDPN-201ENST00000294489 SUFUQ9UMX1 484 aa8.8□□□□□ -1
PDPN-201ENST00000294489 SH2B3Q9UQQ2 575 aa8.8□□□□□ -1
PDPN-201ENST00000294489 WDR37Q9Y2I8 494 aa8.8□□□□□ -1
PDPN-201ENST00000294489 V9GYQ6 96 aa8.8□□□□□ -1
PDPN-201ENST00000294489 PRSS38A1L453 326 aa8.79□□□□□ -1
PDPN-201ENST00000294489 FAM220BPB1ANY3 271 aa8.79□□□□□ -1
PDPN-201ENST00000294489 SH3BGRLO75368 114 aa8.79□□□□□ -1
PDPN-201ENST00000294489 ETHE1O95571 254 aa8.79□□□□□ -1
PDPN-201ENST00000294489 GSNP06396 782 aa8.79□□□□□ -1
PDPN-201ENST00000294489 RAP2AP10114 183 aa8.79□□□□□ -1
PDPN-201ENST00000294489 HPCAL1P37235 193 aa8.79□□□□□ -1
PDPN-201ENST00000294489 CCT8P50990 548 aa8.79□□□□□ -1
PDPN-201ENST00000294489 ABHD18Q0P651 414 aa8.79□□□□□ -1
PDPN-201ENST00000294489 CCDC85BQ15834 202 aaPredicted RBP8.79□□□□□ -1
PDPN-201ENST00000294489 ATP6AP1Q15904 470 aa8.79□□□□□ -1
PDPN-201ENST00000294489 UGT8Q16880 541 aa8.79□□□□□ -1
PDPN-201ENST00000294489 PTCRAQ6ISU1 281 aaPredicted RBP8.79□□□□□ -1
PDPN-201ENST00000294489 UGT2A3Q6UWM9 527 aa8.79□□□□□ -1
PDPN-201ENST00000294489 LPCAT2Q7L5N7 544 aa8.79□□□□□ -1
PDPN-201ENST00000294489 MICU2Q8IYU8 434 aa8.79□□□□□ -1
PDPN-201ENST00000294489 PHACTR4Q8IZ21 702 aa8.79□□□□□ -1
PDPN-201ENST00000294489 KRT78Q8N1N4 520 aa8.79□□□□□ -1
PDPN-201ENST00000294489 GPR156Q8NFN8 814 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms