RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 KDELR2P33947 212 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 RAD23AP54725 363 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 SLBPQ14493 270 aaKnown RBP eCLIP15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 OR2T5Q6IEZ7 315 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 GRHL2Q6ISB3 625 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 TMC5Q6UXY8 1006 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 ZC3H7AQ8IWR0 971 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 ALDH16A1Q8IZ83 802 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 ATG16L2Q8NAA4 619 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 OR2T29Q8NH02 315 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 RASSF1Q9NS23 344 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 SPATA6Q9NWH7 488 aaPredicted RBP15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 ACSL6Q9UKU0 697 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 AP3M1Q9Y2T2 418 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 TDRKHQ9Y2W6 561 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 CFAP20Q9Y6A4 193 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 MTCL1Q9Y4B5 1905 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 SCAMP2O15127 329 aaKnown RBP15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 AXIN1O15169 862 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 MYOGP15173 224 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 CRATP43155 626 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 XAF1Q6GPH4 301 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 CCDC81Q6ZN84 652 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 NEK10Q6ZWH5 1172 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 SPARTQ8N0X7 666 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 ZNF740Q8NDX6 193 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 OR4A15Q8NGL6 344 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 OR5AK3PQ8NH89 298 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 DNAJB8Q8NHS0 232 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 GLMNQ92990 594 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 RSPRY1Q96DX4 576 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 MAGIXQ9H6Y5 334 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 RUBCNLQ9H714 662 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 IL23AQ9NPF7 189 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 TMEM98Q9Y2Y6 226 aa15.24■□□□□ 0.03
NCKIPSD-201ENST00000294129 DOCK9Q9BZ29 2069 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 OTOL1A6NHN0 477 aaPredicted RBP15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 ABCB7O75027 752 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 FABP3P05413 133 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 HNRNPCP07910 306 aaKnown RBP eCLIP15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 HTR1AP08908 422 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 ACPPP15309 386 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 HNF4AP41235 474 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 TRPC1P48995 793 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 ARHGDIAP52565 204 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 MTAPQ13126 283 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 NFE2L1Q14494 772 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 ZNF852Q6ZMS4 543 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 SERPINA11Q86U17 422 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 HIPK1Q86Z02 1210 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 SPPL3Q8TCT6 385 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 CIDECQ96AQ7 238 aaPredicted RBP15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 RHNO1Q9BSD3 238 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 SPASTQ9UBP0 616 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 NPC1O15118 1278 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 DDX6P26196 483 aaKnown RBP eCLIP15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 DCKP27707 260 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 DAPP51397 102 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 EPHA5P54756 1037 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 LAIR2Q6ISS4 152 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 MED27Q6P2C8 311 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 CHPFQ8IZ52 775 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 BADQ92934 168 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 UBE2FQ969M7 185 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 SORBS1Q9BX66 1292 aaKnown RBP15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 SPNS1Q9H2V7 528 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 PAK1IP1Q9NWT1 392 aaPredicted RBP15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 SNX5Q9Y5X3 404 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 GMEB1Q9Y692 573 aa15.23■□□□□ 0.03
NCKIPSD-201ENST00000294129 SLC1A7O00341 560 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 C1orf105O95561 183 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 TFPTP0C1Z6 253 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 BMPR1AP36894 532 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 DPY19L1Q2PZI1 675 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 ANKDD1AQ495B1 522 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 ZNF385BQ569K4 471 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 NAGSQ8N159 534 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 PJA1Q8NG27 643 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 OR13F1Q8NGS4 319 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 SPPL2AQ8TCT8 520 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 MIPOL1Q8TD10 442 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 HDAC2Q92769 488 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 YTHDF1Q9BYJ9 559 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 ASPSCR1Q9BZE9 553 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 IL1RAPQ9NPH3 570 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 FAM120CQ9NX05 1096 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 LRRK1Q38SD2 2015 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 INMTO95050 263 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 PLA2G16P53816 162 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 ISL1P61371 349 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 HTRA4P83105 476 aaPredicted RBP15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 SMN1Q16637 294 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 RBM48Q5RL73 367 aaKnown RBP15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 GPR65Q8IYL9 337 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 MMP21Q8N119 569 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 WDR48Q8TAF3 677 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 ARRDC3Q96B67 414 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 NRBF2Q96F24 287 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 DTD2Q96FN9 168 aa15.22■□□□□ 0.03
NCKIPSD-201ENST00000294129 USE1Q9NZ43 259 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms