RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ANXA6P08133 673 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 GGT1P19440 569 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 HSD17B2P37059 387 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 PPP2CBP62714 309 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 PPP2CAP67775 309 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 NFE2L1Q14494 772 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 ABRAXAS2Q15018 415 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 PTCHD3Q3KNS1 767 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 FAM98BQ52LJ0 330 aaKnown RBP16.21■□□□□ 0.19
CPSF4-201ENST00000292476 GLYATQ6IB77 296 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 USP51Q70EK9 711 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 FAM174AQ8TBP5 190 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 PNPT1Q8TCS8 783 aaKnown RBP16.21■□□□□ 0.19
CPSF4-201ENST00000292476 RAD51AP1Q96B01 352 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 TMEM74Q96NL1 305 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 RDH12Q96NR8 316 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 FAM86C1Q9NVL1 165 aa16.21■□□□□ 0.19
CPSF4-201ENST00000292476 POLR3HQ9Y535 204 aaPredicted RBP16.21■□□□□ 0.19
CPSF4-201ENST00000292476 EI24O14681 340 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 CLOCKO15516 846 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 TRMUO75648 421 aaKnown RBP16.21■□□□□ 0.18
CPSF4-201ENST00000292476 HPRP00739 348 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 IL6P05231 212 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 SLC35G4P0C7Q5 338 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 RAP2AP10114 183 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 ACADLP28330 430 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 CASP2P42575 452 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 GDF5P43026 501 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 OR4D2P58180 307 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 ZNF33BQ06732 778 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 C18orf21Q32NC0 220 aaPredicted RBP16.21■□□□□ 0.18
CPSF4-201ENST00000292476 GGTA1PQ4G0N0 100 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 CACHD1Q5VU97 1274 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 AGTRAPQ6RW13 159 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 TSSK4Q6SA08 328 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 MAML2Q8IZL2 1156 aaPredicted RBP16.21■□□□□ 0.18
CPSF4-201ENST00000292476 LILRA3Q8N6C8 439 aaPredicted RBP16.21■□□□□ 0.18
CPSF4-201ENST00000292476 OR9A1PQ8NGU1 263 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 SLC13A3Q8WWT9 602 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 GFM2Q969S9 779 aaKnown RBP16.21■□□□□ 0.18
CPSF4-201ENST00000292476 SCARF2Q96GP6 870 aaPredicted RBP16.21■□□□□ 0.18
CPSF4-201ENST00000292476 CHID1Q9BWS9 393 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 OR52A5Q9H2C5 316 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 ACTR8Q9H981 624 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 C2orf42Q9NWW7 574 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 SLAMF8Q9P0V8 285 aa16.21■□□□□ 0.18
CPSF4-201ENST00000292476 A0A1B0GTW7 788 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 FAM149AA5PLN7 773 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 TNFRSF10CO14798 259 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 TPST1O60507 370 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 KRT6AP02538 564 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 KRT6BP04259 564 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 CEACAM5P06731 702 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 NCK1P16333 377 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 SLC5A2P31639 672 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 GNPDA1P46926 289 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 KRT6CP48668 564 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 HNRNPFP52597 415 aaKnown RBP16.2■□□□□ 0.18
CPSF4-201ENST00000292476 PLA2G4EQ3MJ16 856 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 ZBED5Q49AG3 693 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 RFTN2Q52LD8 501 aaPredicted RBP16.2■□□□□ 0.18
CPSF4-201ENST00000292476 CYBRD1Q53TN4 286 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 ISLR2Q6UXK2 745 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 MBOAT1Q6ZNC8 495 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 DCUN1D3Q8IWE4 304 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 RAB42Q8N4Z0 105 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 USP7Q93009 1102 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 UGT2B28Q9BY64 529 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 GPRC5BQ9NZH0 403 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 STOX2Q9P2F5 926 aaPredicted RBP16.2■□□□□ 0.18
CPSF4-201ENST00000292476 EBF1Q9UH73 591 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 ASF1AQ9Y294 204 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 NEUROG3Q9Y4Z2 214 aa16.2■□□□□ 0.18
CPSF4-201ENST00000292476 PRAMEF26H0Y7S4 382 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 H3BSA7 217 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 ULK1O75385 1050 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 SLC2A4P14672 509 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 ACPPP15309 386 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 IDSP22304 550 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 ADARB1P78563 741 aaKnown RBP16.19■□□□□ 0.18
CPSF4-201ENST00000292476 NFATC4Q14934 902 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 PYCR3Q53H96 274 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.19■□□□□ 0.18
CPSF4-201ENST00000292476 LIPJQ5W064 366 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 KIAA0895LQ68EN5 471 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 CAPN13Q6MZZ7 669 aaPredicted RBP16.19■□□□□ 0.18
CPSF4-201ENST00000292476 LPCAT2Q7L5N7 544 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 CHST15Q7LFX5 561 aaPredicted RBP16.19■□□□□ 0.18
CPSF4-201ENST00000292476 GPR141Q7Z602 305 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 ZNF786Q8N393 782 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 DTWD1Q8N5C7 304 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 DCBLD1Q8N8Z6 715 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 OR56A3Q8NH54 315 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 TFGQ92734 400 aaPredicted RBP16.19■□□□□ 0.18
CPSF4-201ENST00000292476 ATOH1Q92858 354 aaPredicted RBP16.19■□□□□ 0.18
CPSF4-201ENST00000292476 PKP4Q99569 1192 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 CLMPQ9H6B4 373 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 SNX6Q9UNH7 406 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 SLC22A14Q9Y267 594 aa16.19■□□□□ 0.18
CPSF4-201ENST00000292476 CACNA1HO95180 2353 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms