RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 CNIH3Q8TBE1 160 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 TRUB1Q8WWH5 349 aaKnown RBP12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 XAGE5Q8WWM1 108 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 SLC30A2Q9BRI3 323 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 BHLHE41Q9C0J9 482 aaPredicted RBP12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 HPF1Q9NWY4 346 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 TVP23BQ9NYZ1 205 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 UBFD1O14562 309 aaKnown RBP12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 OR2B3O76000 313 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 GPX3P22352 226 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 ARNTP27540 789 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 HTR2BP41595 481 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 SEMA3BQ13214 749 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 CAMK1Q14012 370 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 GANABQ14697 944 aaKnown RBP12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 CLLU1OSQ5K130 101 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 SERPINA13PQ6UXR4 307 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 PGBD3Q8N328 593 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 POMGNT2Q8NAT1 580 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 RNASE11Q8TAA1 199 aaKnown RBP12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 CYB5D2Q8WUJ1 264 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 USP7Q93009 1102 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 KCNC2Q96PR1 638 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 ZNF696Q9H7X3 374 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 TNFRSF12AQ9NP84 129 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 AASSQ9UDR5 926 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 YARS2Q9Y2Z4 477 aaKnown RBP12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 KIAA1217Q5T5P2 1943 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 LOC100130705A0A1B0GUX0 176 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 MANBAO00462 879 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 TGFB1P01137 390 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 DNTTP04053 509 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 RFC2P35250 354 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 GUCA1AP43080 201 aaPredicted RBP12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 CLK3P49761 638 aaKnown RBP12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 EMX2Q04743 252 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 TOR1AIP1Q5JTV8 583 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 WDR45BQ5MNZ6 344 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 FOXB2Q5VYV0 432 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 SLC22A15Q8IZD6 547 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 RHEBL1Q8TAI7 183 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 BCL2L14Q9BZR8 327 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 ZCCHC2Q9C0B9 1178 aaKnown RBP12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 ELAC1Q9H777 363 aaKnown RBP12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 MKLN1Q9UL63 735 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 POLR1DQ9Y2S0 133 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 SPACA6W5XKT8 324 aa12.18□□□□□ -0.46
SLC6A1-201ENST00000287766 AOC2O75106 756 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 SERPINB7O75635 380 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 RFPL2O75678 378 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 GALTP07902 379 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 TMEM220Q6QAJ8 160 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 SCML4Q8N228 414 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 CSNK1G1Q9HCP0 422 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 CCDC177Q9NQR7 707 aaPredicted RBP12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 AKAP7Q9P0M2 348 aaPredicted RBP12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 FNIP2Q9P278 1114 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 PCTPQ9UKL6 214 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 UBR3Q6ZT12 1888 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 SLC28A2O43868 658 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 TOXO94900 526 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 SLC6A4P31645 630 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 RPA4Q13156 261 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 MINDY1Q8N5J2 469 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 MDGA1Q8NFP4 955 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 ARRDC2Q8TBH0 407 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 RAD51AP1Q96B01 352 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 RHBGQ9H310 441 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 ZDHHC7Q9NXF8 308 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 PCDHGB5Q9Y5G0 923 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 PRSS51A0A1B0GVH4 220 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 ZNF195O14628 629 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 STC2O76061 302 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 PREPP48147 710 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 BMXP51813 675 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 MANFP55145 182 aaKnown RBP12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 PMS2P3Q13401 168 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 ULK3Q6PHR2 472 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 CHST9Q7L1S5 443 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 PGBD5Q8N414 524 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 C1orf52Q8N6N3 182 aaKnown RBP12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 PJA1Q8NG27 643 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 RTP3Q9BQQ7 232 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 RSPH9Q9H1X1 276 aaPredicted RBP12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 SUV39H2Q9H5I1 410 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 SEC14L3Q9UDX4 400 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 GRIP1Q9Y3R0 1128 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 SHROOM3Q8TF72 1996 aa12.17□□□□□ -0.46
SLC6A1-201ENST00000287766 A0A0X1KG70 313 aa12.16□□□□□ -0.46
SLC6A1-201ENST00000287766 HHLA1C9JL84 531 aa12.16□□□□□ -0.46
SLC6A1-201ENST00000287766 M0QZQ0 153 aa12.16□□□□□ -0.46
SLC6A1-201ENST00000287766 NARSO43776 548 aaKnown RBP12.16□□□□□ -0.46
SLC6A1-201ENST00000287766 HCN1O60741 890 aa12.16□□□□□ -0.46
SLC6A1-201ENST00000287766 STATHP02808 62 aa12.16□□□□□ -0.46
SLC6A1-201ENST00000287766 ACRP10323 421 aa12.16□□□□□ -0.46
SLC6A1-201ENST00000287766 CSTF2P33240 577 aaKnown RBP eCLIP12.16□□□□□ -0.46
SLC6A1-201ENST00000287766 FAUP35544 74 aaKnown RBP12.16□□□□□ -0.46
SLC6A1-201ENST00000287766 NFATC3Q12968 1075 aa12.16□□□□□ -0.46
SLC6A1-201ENST00000287766 BIKQ13323 160 aa12.16□□□□□ -0.46
SLC6A1-201ENST00000287766 EFR3AQ14156 821 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms