RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 NCLNQ969V3 563 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 GABARAPL1Q9H0R8 117 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 ANKHQ9HCJ1 492 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 SCHIP1Q9P0W5 487 aaPredicted RBP17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 ANKMY1Q9P2S6 941 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 PCDHGA10Q9Y5H3 936 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 RGS14O43566 566 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 NFATC1O95644 943 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 RPIAP49247 311 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 CTSCP53634 463 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 SLC35A2P78381 396 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 KEAP1Q14145 624 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 C9orf64Q5T6V5 341 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 SHQ1Q6PI26 577 aaKnown RBP17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 PRSS48Q7RTY5 328 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 DNAJB8Q8NHS0 232 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 ARRDC3Q96B67 414 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 PYCR2Q96C36 320 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 ULK4Q96C45 1275 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 TBCDQ9BTW9 1192 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 ASPSCR1Q9BZE9 553 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 PLA2G2FQ9BZM2 168 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 CD244Q9BZW8 370 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 DPY30Q9C005 99 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 FARSBQ9NSD9 589 aaKnown RBP17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 EXD2Q9NVH0 621 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 SCN3BQ9NY72 215 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 ERVK-18Q9QC07 812 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 PMF1-BGLAPU3KQ54 211 aa17.71■□□□□ 0.43
PDLIM3-201ENST00000284767 MRPS14O60783 128 aaKnown RBP17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 PGRP06401 933 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 MVKQ03426 396 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 VAC14Q08AM6 782 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 ZNF234Q14588 700 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 PTGR1Q14914 329 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 NPTX1Q15818 432 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 VITQ6UXI7 678 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 RNF165Q6ZSG1 346 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 UBE2R2Q712K3 238 aaPredicted RBP17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 DPPA4Q7L190 304 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 TECPR1Q7Z6L1 1165 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 B3GNT8Q7Z7M8 397 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 SVOPQ8N4V2 548 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 TBC1D20Q96BZ9 403 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 KAT8Q9H7Z6 458 aaKnown RBP17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 ARL15Q9NXU5 204 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 IGFBP5P24593 272 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 CD6P30203 668 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 ST13P50502 369 aaKnown RBP17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 PPP1R8Q12972 351 aaKnown RBP17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 INAVAQ3KP66 663 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 ZDHHC20Q5W0Z9 365 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 CAPN13Q6MZZ7 669 aaPredicted RBP17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 MILR1Q7Z6M3 343 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 WFIKKN2Q8TEU8 576 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 ELMO1Q92556 727 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 SAMD11Q96NU1 681 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 OPTCQ9UBM4 332 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 ANGPTL3Q9Y5C1 460 aa17.7■□□□□ 0.42
PDLIM3-201ENST00000284767 TRBV5-3A0A0A0MS03 114 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 K7ESM1 405 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 SERPINA1P01009 418 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 FTH1P02794 183 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 GSTT2P0CG29 244 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 GSTT2BP0CG30 244 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 VBP1P61758 197 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 DNASE1L3Q13609 305 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 CALHM3Q86XJ0 350 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 CHPFQ8IZ52 775 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 AP2M1Q96CW1 435 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 PYURFQ96I23 114 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 CLMPQ9H6B4 373 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 CCNB1IP1Q9NPC3 277 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 ASIC5Q9NY37 505 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 TSC22D4Q9Y3Q8 395 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 PLXNA2O75051 1894 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 DOCK8Q8NF50 2099 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 ATG2BQ96BY7 2078 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 TBC1D3BA6NDS4 549 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 SLC28A1O00337 649 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 CLCA4Q14CN2 919 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 HNRNPA1L2Q32P51 320 aaKnown RBP17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 SGO1Q5FBB7 561 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 SPANXN4Q5MJ08 99 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 CACHD1Q5VU97 1274 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 SNX29P2Q8IUI4 249 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 LACC1Q8IV20 430 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 BTBD2Q9BX70 525 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 HCN2Q9UL51 889 aa17.69■□□□□ 0.42
PDLIM3-201ENST00000284767 KIF26AQ9ULI4 1882 aaPredicted RBP17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 LOC730098B7Z3J9 87 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 MAN1A2O60476 641 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 MAGEA2P43356 314 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 MAP2K4P45985 399 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 CDC20Q12834 499 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 CPZQ66K79 652 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 GCNT7Q6ZNI0 430 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 TRAM1L1Q8N609 369 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 RASGEF1AQ8N9B8 481 aa17.68■□□□□ 0.42
PDLIM3-201ENST00000284767 STARD8Q92502 1023 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms