RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 XKR8Q9H6D3 395 aa16■□□□□ 0.15
SH3RF1-201ENST00000284637 GBAP04062 536 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 PROZP22891 400 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 AHCYP23526 432 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 AGTR2P50052 363 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 KCNQ1P51787 676 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 STXBP1P61764 594 aaKnown RBP15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 PPP3R1P63098 170 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 KIAA1614Q5VZ46 1190 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 SLC8B1Q6J4K2 584 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 ARMC10Q8N2F6 343 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 CNDP2Q96KP4 475 aaKnown RBP15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 C12orf66Q96MD2 445 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 FCRL3Q96P31 734 aaPredicted RBP15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 ANKMY1Q9P2S6 941 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 AKAP8O43823 692 aaKnown RBP15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 PDHA2P29803 388 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 GRK6P43250 576 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 STC1P52823 247 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 TMEM44Q2T9K0 475 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 RGMBQ6NW40 437 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 OSTM1Q86WC4 334 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 OR2L5Q8NG80 312 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 LRCH3Q96II8 777 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 ZNF599Q96NL3 588 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 GAL3ST4Q96RP7 486 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 OXCT2Q9BYC2 517 aaPredicted RBP15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 DERL2Q9GZP9 239 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 UPB1Q9UBR1 384 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 LCHNA4D1U4 455 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 C4orf46Q504U0 113 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 CNIH3Q8TBE1 160 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 NPY6RQ99463 290 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 RHCGQ9UBD6 479 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 TNFRSF10DQ9UBN6 386 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 ANKRD66B4E2M5 251 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 CLDN4O14493 209 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 IL32P24001 234 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 C2CD4AQ8NCU7 369 aaPredicted RBP15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 CEP76Q8TAP6 659 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 BEX2Q9BXY8 128 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 CST11Q9H112 138 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 DPAGT1Q9H3H5 408 aa15.99■□□□□ 0.15
SH3RF1-201ENST00000284637 INMT-MINDY4F8WBC2 141 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 CLDN7O95471 211 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 CSN2P05814 226 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 CD2P06729 351 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 LAG3P18627 525 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 GSTM2P28161 218 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 EMX2Q04743 252 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 PTCHD3Q3KNS1 767 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 PRPF38BQ5VTL8 546 aaKnown RBP15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 Q6ZNX1 250 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 ZNF366Q8N895 744 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 EFCAB11Q9BUY7 163 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 UCK2Q9BZX2 261 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 SUV39H2Q9H5I1 410 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 DNAJC27Q9NZQ0 273 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 WRBO00258 174 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 HMGN1P05114 100 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 MAT2AP31153 395 aaKnown RBP15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 CAMK1Q14012 370 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 MBOAT1Q6ZNC8 495 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 ZNF598Q86UK7 904 aaKnown RBP15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 OR7G1Q8NGA0 311 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 PMEPA1Q969W9 287 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 CAMK1GQ96NX5 476 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 KXD1Q9BQD3 176 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 BCL7BQ9BQE9 202 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 PLEKHA1Q9HB21 404 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 IFT46Q9NQC8 304 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 SLC35F4A4IF30 521 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 GNRH1P01148 92 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 ACVR2AP27037 513 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 RAB2AP61019 212 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 ATP6AP1Q15904 470 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 ANKRD26P1Q6NSI1 321 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 KLK6Q92876 244 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 EXO5Q9H790 373 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 SLC31A1O15431 190 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 TLL1O43897 1013 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 CAP1Q01518 475 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 ADGRF1Q5T601 910 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 LRRC70Q7Z2Q7 622 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 DHRS1Q96LJ7 313 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 RIPOR3Q96MK2 946 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 DEFB118Q96PH6 123 aa15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 RIOK2Q9BVS4 552 aaKnown RBP15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 RANBP3Q9H6Z4 567 aaPredicted RBP15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 CHMP1AQ9HD42 196 aaPredicted RBP15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 FARSBQ9NSD9 589 aaKnown RBP15.98■□□□□ 0.15
SH3RF1-201ENST00000284637 PDCD5O14737 125 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 RB1P06400 928 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 ARCN1P48444 511 aaKnown RBP15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 GPR68Q15743 365 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 AMZ2Q86W34 360 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 NUDT13Q86X67 352 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 DCP2Q8IU60 420 aaKnown RBP15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 SLC30A8Q8IWU4 369 aa15.97■□□□□ 0.15
SH3RF1-201ENST00000284637 PMM1Q92871 262 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms