RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 NDUFS4O43181 175 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 KCNQ2O43526 872 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 DIRAS3O95661 229 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 CDKN1CP49918 316 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 RPS14P62263 151 aaKnown RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 FMO1Q01740 532 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TSTQ16762 297 aaKnown RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 PLPP4Q5VZY2 271 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 GLT8D1Q68CQ7 371 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 PAOXQ6QHF9 649 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 UBQLNLQ8IYU4 475 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 PPP1R14DQ9NXH3 145 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TSTD3H0UI37 97 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SLITRK5O94991 958 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 ALDH3B1P43353 468 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 PLP2Q04941 152 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 OTOP3Q7RTS5 596 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 RASGRP3Q8IV61 690 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SLC15A3Q8IY34 581 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 LPPQ93052 612 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM80Q96HE8 168 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 MAGEH1Q9H213 219 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TRAV6A0A075B6T7 132 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SLC15A5A6NIM6 579 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 AQP12BA6NM10 295 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 MT-CYBP00156 380 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 IFNA17P01571 189 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM69Q5SWH9 247 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 PDE12Q6L8Q7 609 aaKnown RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 AQP12AQ8IXF9 295 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SAMD12Q8N8I0 201 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SLC6A7Q99884 636 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TTYH2Q9BSA4 534 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TLE6Q9H808 572 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 LRFN1Q9P244 771 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TLR6Q9Y2C9 796 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 USP31Q70CQ4 1352 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 FAM230AA0A1W2PPH8 454 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 LCHNA4D1U4 455 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 INSIG1O15503 277 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SYNGR4O95473 234 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 OR1D2P34982 312 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 GTF2BQ00403 316 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 FSTL4Q6MZW2 842 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 ZBTB8BQ8NAP8 495 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SIDT2Q8NBJ9 832 aaKnown RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 ASB9Q96DX5 294 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 OR2AG1Q9H205 316 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 DPEP2Q9H4A9 486 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SIRPGQ9P1W8 387 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TIMM22Q9Y584 194 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 F5H0A9 414 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 AIPO00170 330 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TULP2O00295 520 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 PIAS1O75925 651 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 JUNP05412 331 aaKnown RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 CHRM5P08912 532 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SLC6A6P31641 620 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SH3D19Q5HYK7 790 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TSPAN33Q86UF1 283 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SERPINA9Q86WD7 417 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 PROKR1Q8TCW9 393 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 DPYSL5Q9BPU6 564 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 POLMQ9NP87 494 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-201ENST00000282516 HCRTR2O43614 444 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 CYP3A5P20815 502 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 SEMA3AQ14563 771 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 NOMO1Q15155 1222 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 NTRK3Q16288 839 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 OR56B2PQ8NGI1 322 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM203Q969S6 136 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 MSANTD3Q96H12 275 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 COL21A1Q96P44 957 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 B4GALT7Q9UBV7 327 aa8.5□□□□□ -1.05
NIPBL-201ENST00000282516 RNF13O43567 381 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 KLRK1P26718 216 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 NKX6-1P78426 367 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 OR8S1Q8NH09 359 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 STK35Q8TDR2 534 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 DNAJC5Q9H3Z4 198 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 PTGES2Q9H7Z7 377 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 ZIM2Q9NZV7 527 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM9Q9P0T7 183 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 A8MXE2 369 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 PEX12O00623 359 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 TACR2P21452 398 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 PER3P56645 1201 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 YBEYP58557 167 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 GPR68Q15743 365 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 MLIPQ5VWP3 458 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 LRRC55Q6ZSA7 311 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 ESX1Q8N693 406 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 AURKBQ96GD4 344 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 MEN1O00255 615 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 GOT2P00505 430 aaKnown RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 ADCYAP1R1P41586 468 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 POU4F2Q12837 409 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 CCDC58Q4VC31 144 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 DUS1LQ6P1R4 473 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms