RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 TRAV17A0A0B4J275 112 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 CTAGE15A4D2H0 777 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 F8W8V4 182 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 H7BY64 318 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 C19orf84I3L1E1 186 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 GFYI3L273 518 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 KPNA5O15131 536 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 HNRNPRO43390 633 aaKnown RBP8.46□□□□□ -1.06
TPM3-201ENST00000271850 SEC24DO94855 1032 aaPredicted RBP8.46□□□□□ -1.06
TPM3-201ENST00000271850 ESR1P03372 595 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 HEXBP07686 556 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 ERVK-10P10266 1014 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 PKMP14618 531 aaKnown RBP8.46□□□□□ -1.06
TPM3-201ENST00000271850 CHRM3P20309 590 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 OGNP20774 298 aaKnown RBP8.46□□□□□ -1.06
TPM3-201ENST00000271850 PPARGP37231 505 aaPredicted RBP8.46□□□□□ -1.06
TPM3-201ENST00000271850 SKIV2L2P42285 1042 aaKnown RBP8.46□□□□□ -1.06
TPM3-201ENST00000271850 NPY2RP49146 381 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 CTBP1Q13363 440 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 ARHGAP19Q14CB8 494 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 INAQ16352 499 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 ANKRD20A4Q4UJ75 823 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 GARNL3Q5VVW2 1013 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 FCRLBQ6BAA4 426 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 TTC23LQ6PF05 361 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 MBOAT1Q6ZNC8 495 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 NEK10Q6ZWH5 1172 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 PIWIL4Q7Z3Z4 852 aaKnown RBP8.46□□□□□ -1.06
TPM3-201ENST00000271850 CTAGE6Q86UF2 777 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 CHERPQ8IWX8 916 aaKnown RBP8.46□□□□□ -1.06
TPM3-201ENST00000271850 MCEMP1Q8IX19 187 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 SLC34A3Q8N130 599 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 SPC24Q8NBT2 197 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 FBXO15Q8NCQ5 510 aaPredicted RBP8.46□□□□□ -1.06
TPM3-201ENST00000271850 OR9A4Q8NGU2 314 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 CD200R1Q8TD46 325 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 ASB11Q8WXH4 323 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 PRAP1Q96NZ9 151 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 SIGLEC12Q96PQ1 595 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 DRC3Q9H069 523 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 RNF32Q9H0A6 362 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 MKKSQ9NPJ1 570 aaPredicted RBP8.46□□□□□ -1.06
TPM3-201ENST00000271850 FBXO6Q9NRD1 293 aaPredicted RBP8.46□□□□□ -1.06
TPM3-201ENST00000271850 RIC8BQ9NVN3 520 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 BFARQ9NZS9 450 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 ABI3Q9P2A4 366 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 COPG2Q9UBF2 871 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 ADAMTS6Q9UKP5 1117 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 MKL2Q9ULH7 1088 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 NEU2Q9Y3R4 380 aa8.46□□□□□ -1.06
TPM3-201ENST00000271850 A0A1B0GUH1 482 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 DYTNA2CJ06 578 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 OR5H15A6NDH6 313 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 LCMT2O60294 686 aaKnown RBP8.45□□□□□ -1.06
TPM3-201ENST00000271850 PHF2O75151 1096 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 UNC5CO95185 931 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 FGGP02679 453 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 EZRP15311 586 aaKnown RBP8.45□□□□□ -1.06
TPM3-201ENST00000271850 IL1RNP18510 177 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 FDXRP22570 491 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 CDC25BP30305 580 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 RPA3P35244 121 aaPredicted RBP8.45□□□□□ -1.06
TPM3-201ENST00000271850 COILP38432 576 aaPredicted RBP8.45□□□□□ -1.06
TPM3-201ENST00000271850 BCL6P41182 706 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 SLC1A2P43004 574 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 CA7P43166 264 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 MAGEA3P43357 314 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 VPS41P49754 854 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 PGGT1BP53609 377 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 MPP1Q00013 466 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 RELAQ04206 551 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 TSTA3Q13630 321 aaPredicted RBP8.45□□□□□ -1.06
TPM3-201ENST00000271850 FAM53BQ14153 422 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 C3AR1Q16581 482 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 IRAK1BP1Q5VVH5 260 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 ZNF470Q6ECI4 717 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 MRNIPQ6NTE8 343 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 TMEM214Q6NUQ4 689 aaKnown RBP8.45□□□□□ -1.06
TPM3-201ENST00000271850 NEPROQ6NW34 567 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 H3F3CQ6NXT2 135 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 GFRALQ6UXV0 394 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 RIPOR1Q6ZS17 1223 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 ZNF295-AS1Q8N0V1 137 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 BEST3Q8N1M1 668 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 OTUD6BQ8N6M0 293 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 MDS2Q8NDY4 140 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 MAGEC3Q8TD91 643 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 TM4SF19Q96DZ7 209 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 FOPNLQ96NB1 174 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 TCF12Q99081 682 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 GPR21Q99679 349 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 YIPF2Q9BWQ6 316 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 TRIM8Q9BZR9 551 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 PLAC1Q9HBJ0 212 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 ABCF3Q9NUQ8 709 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 HCN3Q9P1Z3 774 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 SCN3AQ9NY46 2000 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 CACNA1CQ13936 2221 aa8.45□□□□□ -1.06
TPM3-201ENST00000271850 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.44□□□□□ -1.06
TPM3-201ENST00000271850 TRGV8A0A0C4DH27 118 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms