RNA–Protein interactions for RNA: ENST00000270570.8

SLC47A1-201, Transcript of solute carrier family 47 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC47A1, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-201ENST00000270570 MAD2L1BPQ15013 274 aaPredicted RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 UGT8Q16880 541 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 COX20Q5RI15 118 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 KIAA1614Q5VZ46 1190 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 ANKRD13BQ86YJ7 626 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 TAGAPQ8N103 731 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 AADATQ8N5Z0 425 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 SLC5A8Q8N695 610 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 PCSK9Q8NBP7 692 aaKnown RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 GLB1L3Q8NCI6 653 aaPredicted RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 C7orf57Q8NEG2 295 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 SORBS1Q9BX66 1292 aaKnown RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 WDR12Q9GZL7 423 aaKnown RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 OR51B5Q9H339 312 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 PRKAB1Q9Y478 270 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 SYNDIG1LA6NDD5 238 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 MANSC4A6NHS7 340 aaPredicted RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 AQP9O43315 295 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 CCNDBP1O95273 360 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 ITIH1P19827 911 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 DNAJA1P31689 397 aaKnown RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 S100A5P33763 92 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 CTSKP43235 329 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 LMAN2Q12907 356 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 OXA1LQ15070 435 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 LEXMQ3ZCV2 418 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 OLIG3Q7RTU3 272 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 BCDIN3DQ7Z5W3 292 aaKnown RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 MMP21Q8N119 569 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 SCAIQ8N9R8 606 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 OR4A15Q8NGL6 344 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 TMEM203Q969S6 136 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 CIDECQ96AQ7 238 aaPredicted RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 PKP4Q99569 1192 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 CENPOQ9BU64 300 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 TRIT1Q9H3H1 467 aaKnown RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 IL37Q9NZH6 218 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 NOX1Q9Y5S8 564 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 A0A1W2PRU2 124 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 KCNK5O95279 499 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 HPRP00739 348 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 SPNP16150 400 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 HMGA1P17096 107 aaKnown RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 JUNBP17275 347 aaPredicted RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 B4GALNT1Q00973 533 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 SHQ1Q6PI26 577 aaKnown RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 DPY19L3Q6ZPD9 716 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 VANGL1Q8TAA9 524 aaPredicted RBP12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 CYB5D2Q8WUJ1 264 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 DUSP26Q9BV47 211 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 IL1RAPQ9NPH3 570 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 KCTD5Q9NXV2 234 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 B4GALT6Q9UBX8 382 aa12.72□□□□□ -0.37
SLC47A1-201ENST00000270570 UNCXA6NJT0 531 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 H3BM21 787 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 M0QX08 132 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 GFRA2O00451 464 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 SLC22A1O15245 554 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 SERPIND1P05546 499 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 OR56A5P0C7T3 313 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 PABPC1P11940 636 aaKnown RBP12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 XPAP23025 273 aaPredicted RBP12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 GRK5P34947 590 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 ETV3P41162 512 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 NSG1P42857 185 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 NKX3-2P78367 333 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 UBE3AQ05086 875 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 TOP3AQ13472 1001 aaPredicted RBP12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 GAB1Q13480 694 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 TCTN1Q2MV58 587 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 TRIM60Q495X7 471 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.71□□□□□ -0.373e-6■■□□□ 13.2
SLC47A1-201ENST00000270570 OTOP2Q7RTS6 562 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 ENTHD1Q8IYW4 607 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 STARD8Q92502 1023 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 DHRS1Q96LJ7 313 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 SAMD11Q96NU1 681 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 CASD1Q96PB1 797 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 NIPSNAP1Q9BPW8 284 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 BEX2Q9BXY8 128 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 DNAJC11Q9NVH1 559 aa12.71□□□□□ -0.37
SLC47A1-201ENST00000270570 H7C4K7 107 aa12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 IGSF6O95976 241 aa12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 HOXA9P31269 272 aa12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 CHI3L1P36222 383 aaPredicted RBP12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 FAM214AQ32MH5 1076 aa12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 CPTPQ5TA50 214 aa12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 RSBN1Q5VWQ0 802 aaPredicted RBP12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 ATG9BQ674R7 924 aa12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 PLEKHG7Q6ZR37 379 aa12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 CHD5Q8TDI0 1954 aa12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 WRAP53Q9BUR4 548 aaKnown RBP12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 ZNF334Q9HCZ1 680 aaPredicted RBP12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 EHD3Q9NZN3 535 aa12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 RNF6Q9Y252 685 aa12.71□□□□□ -0.38
SLC47A1-201ENST00000270570 FAM220BPB1ANY3 271 aa12.7□□□□□ -0.38
SLC47A1-201ENST00000270570 NEDD8-MDP1E9PL57 170 aa12.7□□□□□ -0.38
SLC47A1-201ENST00000270570 GABARAPO95166 117 aa12.7□□□□□ -0.38
SLC47A1-201ENST00000270570 RETP07949 1114 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms