RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 GABARAPL3Q9BY60 117 aa26.56■■□□□ 1.84
CBX4-201ENST00000269397 ABCB1P08183 1280 aaPredicted RBP26.55■■□□□ 1.84
CBX4-201ENST00000269397 CHIT1Q13231 466 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 FUT10Q6P4F1 479 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 ANGPTL8Q6UXH0 198 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 ZSWIM9Q86XI8 627 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 PGBD3Q8N328 593 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 KCNS3Q9BQ31 491 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 KCTD5Q9NXV2 234 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 PCDHGB6Q9Y5F9 930 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 FAM47E-STBD1D6RA91 191 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 TNFRSF11BO00300 401 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 HAT1O14929 419 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 KMOO15229 486 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 BNIP3LO60238 219 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 PTTG1O95997 202 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 BCL2L1Q07817 233 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 ST3GAL4Q11206 333 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 RSBN1Q5VWQ0 802 aaPredicted RBP26.55■■□□□ 1.84
CBX4-201ENST00000269397 APCDD1Q8J025 514 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 SYNPOQ8N3V7 929 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 NIPSNAP1Q9BPW8 284 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 NEK6Q9HC98 313 aa26.55■■□□□ 1.84
CBX4-201ENST00000269397 BOP1Q14137 746 aaKnown RBP26.54■■□□□ 1.84
CBX4-201ENST00000269397 FAM9CQ8IZT9 166 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 EPYCQ99645 322 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 ERVK13-1Q9NX77 482 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 SPATA7Q9P0W8 599 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 PCDHGB3Q9Y5G1 929 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 TMEM229AB2RXF0 380 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 ADAMTS4O75173 837 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 S100A1P23297 94 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 SPAM1P38567 509 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 SLC11A1P49279 550 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 B4GALNT1Q00973 533 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 LRRC66Q68CR7 880 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 ADNP2Q6IQ32 1131 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 CYP4Z2PQ8N1L4 340 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 P2RY13Q9BPV8 354 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 TTLL2Q9BWV7 592 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 CWH43Q9H720 699 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 RAPGEFL1Q9UHV5 662 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 LYVE1Q9Y5Y7 322 aa26.54■■□□□ 1.84
CBX4-201ENST00000269397 CCNKO75909 580 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 CKBP12277 381 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 RGS6P49758 472 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 DGKEP52429 567 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 ZNF45Q02386 682 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 PPIGQ13427 754 aaKnown RBP eCLIP26.53■■□□□ 1.844e-11■■□□□ 13.5
CBX4-201ENST00000269397 CDKN3Q16667 212 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 C2orf69Q8N8R5 385 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 PLD4Q96BZ4 506 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 ZNF226Q9NYT6 803 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 EHD3Q9NZN3 535 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 NOX1Q9Y5S8 564 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 NPIPB15A6NHN6 443 aaPredicted RBP26.53■■□□□ 1.84
CBX4-201ENST00000269397 E9PQ18 207 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 CTDSP2O14595 271 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 MED26O95402 600 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 HIST1H2AGP0C0S8 130 aaPredicted RBP26.53■■□□□ 1.84
CBX4-201ENST00000269397 HIST1H2ADP20671 130 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 METTL2BQ6P1Q9 378 aaKnown RBP26.53■■□□□ 1.84
CBX4-201ENST00000269397 LRRC70Q7Z2Q7 622 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 NAGSQ8N159 534 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 CSGALNACT1Q8TDX6 532 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 HIST1H2AHQ96KK5 128 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 CDK5RAP1Q96SZ6 601 aaKnown RBP26.53■■□□□ 1.84
CBX4-201ENST00000269397 HIST1H2AJQ99878 128 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 H2AFJQ9BTM1 129 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 NXF2Q9GZY0 626 aaKnown RBP26.53■■□□□ 1.84
CBX4-201ENST00000269397 PCDHB11Q9Y5F2 797 aa26.53■■□□□ 1.84
CBX4-201ENST00000269397 LAMA2P24043 3122 aaKnown RBP26.53■■□□□ 1.84
CBX4-201ENST00000269397 ARHGEF15O94989 841 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 ADRA2AP08913 450 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 CDH12P55289 794 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 CSNK2BP67870 215 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 SRSF11Q05519 484 aaKnown RBP26.52■■□□□ 1.84
CBX4-201ENST00000269397 PRKCDQ05655 676 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 ATP13A5Q4VNC0 1218 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 C17orf99Q6UX52 265 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 GPR155Q7Z3F1 870 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 ZNF605Q86T29 641 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 KBTBD8Q8NFY9 601 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 OR10G2Q8NGC3 310 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 SOCS4Q8WXH5 440 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 OR5M11Q96RB7 305 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 COPS8Q99627 209 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 ADPRHL2Q9NX46 363 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 NDUFAF4Q9P032 175 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 PCDH7O60245 1069 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 GCM2O75603 506 aaPredicted RBP26.52■■□□□ 1.84
CBX4-201ENST00000269397 CD22P20273 847 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 GAB1Q13480 694 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 LRRC73Q5JTD7 316 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 TCAIMQ8N3R3 496 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 NUAK2Q9H093 628 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 RETREG1Q9H6L5 497 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 PCDHGA3Q9Y5H0 932 aa26.52■■□□□ 1.84
CBX4-201ENST00000269397 RPLP2P05387 115 aaKnown RBP26.52■■□□□ 1.84
CBX4-201ENST00000269397 NSG1P42857 185 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms