RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 LAMP1P11279 417 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 ITPKAP23677 461 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 CCR3P51677 355 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 KCNJ10P78508 379 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 CYP4F8P98187 520 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 ATP1A4Q13733 1029 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 KCNC3Q14003 757 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 CYP2A13Q16696 494 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 KIAA1614Q5VZ46 1190 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 ASTLQ6HA08 431 aaPredicted RBP12.02□□□□□ -0.48
BEST3-201ENST00000266661 FAM124AQ86V42 546 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 TMC8Q8IU68 726 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 SYT12Q8IV01 421 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 ZBTB8BQ8NAP8 495 aaPredicted RBP12.02□□□□□ -0.48
BEST3-201ENST00000266661 OR6Q1Q8NGQ2 317 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 ZFP90Q8TF47 636 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 PHF10Q8WUB8 498 aaKnown RBP12.02□□□□□ -0.48
BEST3-201ENST00000266661 UBE2FQ969M7 185 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 ASIC4Q96FT7 647 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 YME1L1Q96TA2 773 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 DPH2Q9BQC3 489 aaPredicted RBP12.02□□□□□ -0.48
BEST3-201ENST00000266661 SPATA9Q9BWV2 254 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 EBPLQ9BY08 206 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 GABARAPL3Q9BY60 117 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 ASPSCR1Q9BZE9 553 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 CCDC90BQ9GZT6 254 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 MRPL17Q9NRX2 175 aaKnown RBP12.02□□□□□ -0.48
BEST3-201ENST00000266661 GIN1Q9NXP7 522 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 PDP1Q9P0J1 537 aaPredicted RBP12.02□□□□□ -0.48
BEST3-201ENST00000266661 CFAP97Q9P2B7 532 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 VPS29Q9UBQ0 182 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 BTNL2Q9UIR0 455 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 LSM7Q9UK45 103 aaKnown RBP12.02□□□□□ -0.48
BEST3-201ENST00000266661 MAFFQ9ULX9 164 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 GMPPBQ9Y5P6 360 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 AP1M2Q9Y6Q5 423 aa12.02□□□□□ -0.48
BEST3-201ENST00000266661 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.02□□□□□ -0.49
BEST3-201ENST00000266661 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.02□□□□□ -0.49
BEST3-201ENST00000266661 OR2A25A4D2G3 310 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 UPK3BL1B0FP48 263 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 UPK3BL2E5RIL1 263 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 H0YIV9 168 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 PCDHGA12O60330 932 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 MAN1A2O60476 641 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 LILRB3O75022 631 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 CYP4B1P13584 511 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 CYP2A7P20853 494 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 HLA-FP30511 346 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 HALP42357 657 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.02□□□□□ -0.49
BEST3-201ENST00000266661 UBE2UQ5VVX9 321 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 MLIPQ5VWP3 458 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 DPY19L3Q6ZPD9 716 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 SLCO6A1Q86UG4 719 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 ZNF689Q96CS4 500 aaPredicted RBP12.02□□□□□ -0.49
BEST3-201ENST00000266661 COQ8BQ96D53 544 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 DACH2Q96NX9 599 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 EPYCQ99645 322 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 APOL4Q9BPW4 351 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 WDR12Q9GZL7 423 aaKnown RBP12.02□□□□□ -0.49
BEST3-201ENST00000266661 ATG10Q9H0Y0 220 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 NKX2-4Q9H2Z4 354 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 RC3H2Q9HBD1 1191 aaKnown RBP12.02□□□□□ -0.49
BEST3-201ENST00000266661 HMG20AQ9NP66 347 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 CCNB1IP1Q9NPC3 277 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 SCN3BQ9NY72 215 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 DOLKQ9UPQ8 538 aa12.02□□□□□ -0.49
BEST3-201ENST00000266661 EXO1Q9UQ84 846 aaKnown RBP12.02□□□□□ -0.49
BEST3-201ENST00000266661 RUVBL1Q9Y265 456 aaKnown RBP12.02□□□□□ -0.49
BEST3-201ENST00000266661 GABRR3A8MPY1 467 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 ARHGEF33A8MVX0 844 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 TTC34A8MYJ7 566 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 WASH3PC4AMC7 463 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 SCAMP2O15127 329 aaKnown RBP12.01□□□□□ -0.49
BEST3-201ENST00000266661 KPNA5O15131 536 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 RGS10O43665 173 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 ADAM23O75077 832 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 PSIP1O75475 530 aaKnown RBP12.01□□□□□ -0.49
BEST3-201ENST00000266661 AP2A2O94973 939 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 ETHE1O95571 254 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 POP4O95707 220 aaKnown RBP12.01□□□□□ -0.49
BEST3-201ENST00000266661 GSTM1P09488 218 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 NUDT7P0C024 238 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 BMP4P12644 408 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 HSD3B1P14060 373 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 HSD3B2P26439 372 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 KRT20P35900 424 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 HPCAL1P37235 193 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 ARHGDIAP52565 204 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 MVDP53602 400 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 RPP38P78345 283 aaKnown RBP12.01□□□□□ -0.49
BEST3-201ENST00000266661 CREMQ03060 361 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 OCA2Q04671 838 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 NPRL3Q12980 569 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 DOC2AQ14183 400 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 HKDC1Q2TB90 917 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 PROX2Q3B8N5 592 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 GRHL2Q6ISB3 625 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 ZNF621Q6ZSS3 439 aa12.01□□□□□ -0.49
BEST3-201ENST00000266661 P2RY8Q86VZ1 359 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms