RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 USP39Q53GS9 565 aaKnown RBP8.5□□□□□ -1.05
VAPB-201ENST00000265619 FIP1L1Q6UN15 594 aaKnown RBP8.5□□□□□ -1.05
VAPB-201ENST00000265619 METTL23Q86XA0 190 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 CDC26Q8NHZ8 85 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 RNF139Q8WU17 664 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 RBPMSQ93062 196 aaKnown RBP8.5□□□□□ -1.05
VAPB-201ENST00000265619 OPALINQ96PE5 141 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 RBP7Q96R05 134 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 ERVK-6Q9BXR3 956 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 SLC25A37Q9NYZ2 338 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 GJD2Q9UKL4 321 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 ASB1Q9Y576 335 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 ZSWIM8A7E2V4 1837 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 A0A1W2PRG6 482 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 OR51F1A6NGY5 319 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 RRN3P2A6NIE6 340 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 CXCR6O00574 342 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 FZD6O60353 706 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 PIGRP01833 764 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 MTHFD2P13995 350 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 TIE1P35590 1138 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 NNMTP40261 264 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 AGTR2P50052 363 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 AKR1D1P51857 326 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 PURAQ00577 322 aaKnown RBP8.5□□□□□ -1.05
VAPB-201ENST00000265619 RPA4Q13156 261 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 COQ5Q5HYK3 327 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 PDZK1Q5T2W1 519 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 OTUD1Q5VV17 481 aaPredicted RBP8.5□□□□□ -1.05
VAPB-201ENST00000265619 GPR139Q6DWJ6 353 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 UNC5DQ6UXZ4 953 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 FAM124AQ86V42 546 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 FAM9CQ8IZT9 166 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 FANK1Q8TC84 345 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 SLC22A8Q8TCC7 542 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 NCLNQ969V3 563 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 FAM149B1Q96BN6 582 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 CCDC126Q96EE4 140 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 MYO19Q96H55 970 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 ZNF578Q96N58 590 aaPredicted RBP8.5□□□□□ -1.05
VAPB-201ENST00000265619 QRFPRQ96P65 431 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 CDK15Q96Q40 435 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 MED10Q9BTT4 135 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 TRIM45Q9H8W5 580 aaPredicted RBP8.5□□□□□ -1.05
VAPB-201ENST00000265619 PSORS1C1Q9UIG5 152 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 TRHDEQ9UKU6 1024 aa8.5□□□□□ -1.05
VAPB-201ENST00000265619 NOSIPQ9Y314 301 aaKnown RBP8.5□□□□□ -1.05
VAPB-201ENST00000265619 A0A087X1B8 175 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 STX7O15400 261 aaKnown RBP8.49□□□□□ -1.05
VAPB-201ENST00000265619 FAM157BP0CG42 384 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 RRASP10301 218 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 DARSP14868 501 aaKnown RBP8.49□□□□□ -1.05
VAPB-201ENST00000265619 CPN2P22792 545 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 APEX1P27695 318 aaKnown RBP8.49□□□□□ -1.05
VAPB-201ENST00000265619 SOX3P41225 446 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 SCN1BQ07699 218 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 NOGQ13253 232 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 ELOAQ14241 798 aaKnown RBP8.49□□□□□ -1.05
VAPB-201ENST00000265619 ATP6AP1LQ52LC2 224 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 TIGD3Q6B0B8 471 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 SLC27A1Q6PCB7 646 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 C17orf107Q6ZR85 190 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 LRRC8DQ7L1W4 858 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 C2CD4AQ8NCU7 369 aaPredicted RBP8.49□□□□□ -1.05
VAPB-201ENST00000265619 SETD9Q8NE22 299 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 ASB12Q8WXK4 309 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 L3HYPDHQ96EM0 354 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 MS4A3Q96HJ5 214 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 ASPNQ9BXN1 380 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 RACGAP1Q9H0H5 632 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 EXOSC4Q9NPD3 245 aaKnown RBP8.49□□□□□ -1.05
VAPB-201ENST00000265619 PDP1Q9P0J1 537 aaPredicted RBP8.49□□□□□ -1.05
VAPB-201ENST00000265619 DPP7Q9UHL4 492 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 FZD10Q9ULW2 581 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 ST3GAL5Q9UNP4 418 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 ORC6Q9Y5N6 252 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 TCRBV16S1A1N1A0A5B0 115 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 SLC22A23A1A5C7 686 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 EFCAB10A6NFE3 127 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 RAF1P04049 648 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 CDK1P06493 297 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 ACSM4P0C7M7 580 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 PRR35P0CG20 571 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 SOX6P35712 828 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 RRAS2P62070 204 aaPredicted RBP8.49□□□□□ -1.05
VAPB-201ENST00000265619 BNC1Q01954 994 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 KEAP1Q14145 624 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 FCN2Q15485 313 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 TBCEQ15813 527 aaPredicted RBP8.49□□□□□ -1.05
VAPB-201ENST00000265619 KLHL17Q6TDP4 642 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 KIAA0907Q7Z7F0 614 aaPredicted RBP8.49□□□□□ -1.05
VAPB-201ENST00000265619 CNTN4Q8IWV2 1026 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 ADHFE1Q8IWW8 467 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 GPALPP1Q8IXQ4 340 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 ENKURQ8TC29 256 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 THUMPD3Q9BV44 507 aaKnown RBP8.49□□□□□ -1.05
VAPB-201ENST00000265619 REG4Q9BYZ8 158 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 SHARPINQ9H0F6 387 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 TTYH1Q9H313 450 aaPredicted RBP8.49□□□□□ -1.05
VAPB-201ENST00000265619 RERGLQ9H628 205 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms