RNA–Protein interactions for RNA: ENST00000265560.8

USP4-201, Transcript of ubiquitin specific peptidase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP4, Length 3,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-201ENST00000265560 KLHDC8AQ8IYD2 350 aa15.83■□□□□ 0.13
USP4-201ENST00000265560 MINDY1Q8N5J2 469 aa15.83■□□□□ 0.13
USP4-201ENST00000265560 PNPT1Q8TCS8 783 aaKnown RBP15.83■□□□□ 0.13
USP4-201ENST00000265560 ASB12Q8WXK4 309 aa15.83■□□□□ 0.13
USP4-201ENST00000265560 REXO4Q9GZR2 422 aaKnown RBP15.83■□□□□ 0.13
USP4-201ENST00000265560 CD320Q9NPF0 282 aa15.83■□□□□ 0.13
USP4-201ENST00000265560 SH3BP4Q9P0V3 963 aa15.83■□□□□ 0.13
USP4-201ENST00000265560 STX18Q9P2W9 335 aaKnown RBP15.83■□□□□ 0.13
USP4-201ENST00000265560 MRPS17Q9Y2R5 130 aaKnown RBP15.83■□□□□ 0.13
USP4-201ENST00000265560 PI4KAP42356 2102 aa15.83■□□□□ 0.13
USP4-201ENST00000265560 MAP3K13O43283 966 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 PCDH7O60245 1069 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 NDUFS2O75306 463 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 CPSF4O95639 269 aaKnown RBP15.83■□□□□ 0.12
USP4-201ENST00000265560 COX7A2P14406 83 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 ATP6V1B2P21281 511 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 RPL6Q02878 288 aaKnown RBP15.83■□□□□ 0.12
USP4-201ENST00000265560 PRKCQQ04759 706 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 CYP4F3Q08477 520 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 FZD2Q14332 565 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 LRRC32Q14392 662 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 TAF8Q7Z7C8 310 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 SETD7Q8WTS6 366 aaKnown RBP15.83■□□□□ 0.12
USP4-201ENST00000265560 HOPXQ9BPY8 73 aaPredicted RBP15.83■□□□□ 0.12
USP4-201ENST00000265560 A0A1W2PPC4 97 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 ANKDD1BA6NHY2 528 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 EIF4E1BA6NMX2 242 aaKnown RBP15.83■□□□□ 0.12
USP4-201ENST00000265560 H3BNX3 289 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 ERGP11308 486 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 OR4D2P58180 307 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 ABI3BPQ7Z7G0 1075 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 MSRB3Q8IXL7 192 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 AMER3Q8N944 861 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 OR4K1Q8NGD4 311 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 MSANTD3Q96H12 275 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 CGREF1Q99674 301 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 ORAI3Q9BRQ5 295 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 HAUS8Q9BT25 410 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 DPH7Q9BTV6 452 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 ALG2Q9H553 416 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 COPS7BQ9H9Q2 264 aaPredicted RBP15.83■□□□□ 0.12
USP4-201ENST00000265560 WNT16Q9UBV4 365 aa15.83■□□□□ 0.12
USP4-201ENST00000265560 ZNF839A8K0R7 811 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 CHURC1-FNTBB4DL54 471 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 BTN3A3O00478 584 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 BCAS2O75934 225 aaPredicted RBP15.82■□□□□ 0.12
USP4-201ENST00000265560 WNT1P04628 370 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 ABCB1P08183 1280 aaPredicted RBP15.82■□□□□ 0.12
USP4-201ENST00000265560 RPSAP08865 295 aaKnown RBP15.82■□□□□ 0.12
USP4-201ENST00000265560 PIM1P11309 404 aaPredicted RBP15.82■□□□□ 0.12
USP4-201ENST00000265560 PLA2G16P53816 162 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 ILF3Q12906 894 aaKnown RBP eCLIP15.82■□□□□ 0.12
USP4-201ENST00000265560 HACD2Q6Y1H2 254 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 CHTF18Q8WVB6 975 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 ASB9Q96DX5 294 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 C5AR2Q9P296 337 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 NEUROG3Q9Y4Z2 214 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 PCDHB14Q9Y5E9 798 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 WASHC1A8K0Z3 465 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 GABRR3A8MPY1 467 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 TPST1O60507 370 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 KCNH1O95259 989 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 MT-ND1P03886 318 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 PRPS2P11908 318 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 PKLRP30613 574 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 CCR8P51685 355 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 STARD6P59095 220 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 CSNK1G2P78368 415 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 PRDX1Q06830 199 aaKnown RBP15.82■□□□□ 0.12
USP4-201ENST00000265560 KIAA1614Q5VZ46 1190 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 WASH2PQ6VEQ5 465 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 LRRC74BQ6ZQY2 392 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 LAS2Q8IYD9 372 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 CHCHD4Q8N4Q1 142 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 OR10A6Q8NH74 314 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 KLHDC7BQ96G42 594 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 RSRC1Q96IZ7 334 aaKnown RBP15.82■□□□□ 0.12
USP4-201ENST00000265560 NECAB3Q96P71 396 aaPredicted RBP15.82■□□□□ 0.12
USP4-201ENST00000265560 TAAR2Q9P1P5 351 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 RUVBL1Q9Y265 456 aaKnown RBP15.82■□□□□ 0.12
USP4-201ENST00000265560 HS3ST3A1Q9Y663 406 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 UNC13CQ8NB66 2214 aa15.82■□□□□ 0.12
USP4-201ENST00000265560 SPTY2D1-AS1A0A0U1RR47 76 aa15.81■□□□□ 0.12
USP4-201ENST00000265560 LMNAP02545 664 aaKnown RBP15.81■□□□□ 0.12
USP4-201ENST00000265560 F3P13726 295 aa15.81■□□□□ 0.12
USP4-201ENST00000265560 CTSEP14091 401 aa15.81■□□□□ 0.12
USP4-201ENST00000265560 POLR2CP19387 275 aaPredicted RBP15.81■□□□□ 0.12
USP4-201ENST00000265560 BCKDHBP21953 392 aa15.81■□□□□ 0.12
USP4-201ENST00000265560 RABIFP47224 123 aa15.81■□□□□ 0.12
USP4-201ENST00000265560 GPR18Q14330 331 aa15.81■□□□□ 0.12
USP4-201ENST00000265560 ARHGAP19Q14CB8 494 aa15.81■□□□□ 0.12
USP4-201ENST00000265560 RNF165Q6ZSG1 346 aa15.81■□□□□ 0.12
USP4-201ENST00000265560 GPR180Q86V85 440 aa15.81■□□□□ 0.12
USP4-201ENST00000265560 AMIGO1Q86WK6 493 aa15.81■□□□□ 0.12
USP4-201ENST00000265560 TRIM48Q8IWZ4 208 aa15.81■□□□□ 0.12
USP4-201ENST00000265560 RIMKLAQ8IXN7 391 aa15.81■□□□□ 0.12
USP4-201ENST00000265560 FAM46DQ8NEK8 389 aa15.81■□□□□ 0.12
USP4-201ENST00000265560 MAFAQ8NHW3 353 aaPredicted RBP15.81■□□□□ 0.12
USP4-201ENST00000265560 C11orf24Q96F05 449 aaPredicted RBP15.81■□□□□ 0.12
USP4-201ENST00000265560 AIF1LQ9BQI0 150 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms