RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 FCHO2Q0JRZ9 810 aa15.77■□□□□ 0.12
CTCF-201ENST00000264010 ZNF846Q147U1 533 aa15.77■□□□□ 0.12
CTCF-201ENST00000264010 TUBA3EQ6PEY2 450 aa15.77■□□□□ 0.12
CTCF-201ENST00000264010 SNX29P2Q8IUI4 249 aa15.77■□□□□ 0.12
CTCF-201ENST00000264010 OR2A12Q8NGT7 310 aa15.77■□□□□ 0.12
CTCF-201ENST00000264010 ZNF717Q9BY31 904 aaPredicted RBP15.77■□□□□ 0.12
CTCF-201ENST00000264010 CASP8AP2Q9UKL3 1982 aa15.77■□□□□ 0.12
CTCF-201ENST00000264010 KRT87PA6NCN2 255 aa15.77■□□□□ 0.11
CTCF-201ENST00000264010 AZGP1P25311 298 aaKnown RBP15.77■□□□□ 0.11
CTCF-201ENST00000264010 MRPL19P49406 292 aaKnown RBP15.77■□□□□ 0.11
CTCF-201ENST00000264010 CARM1Q86X55 608 aa15.77■□□□□ 0.11
CTCF-201ENST00000264010 FAM217AQ8IXS0 508 aa15.77■□□□□ 0.11
CTCF-201ENST00000264010 OR4A15Q8NGL6 344 aa15.77■□□□□ 0.11
CTCF-201ENST00000264010 LRRC20Q8TCA0 184 aa15.77■□□□□ 0.11
CTCF-201ENST00000264010 OTULINQ96BN8 352 aa15.77■□□□□ 0.11
CTCF-201ENST00000264010 CLIP3Q96DZ5 547 aa15.77■□□□□ 0.11
CTCF-201ENST00000264010 NUS1Q96E22 293 aa15.77■□□□□ 0.11
CTCF-201ENST00000264010 NARS2Q96I59 477 aaKnown RBP15.77■□□□□ 0.11
CTCF-201ENST00000264010 FAM120CQ9NX05 1096 aaKnown RBP15.77■□□□□ 0.11
CTCF-201ENST00000264010 TPRKBQ9Y3C4 175 aa15.77■□□□□ 0.11
CTCF-201ENST00000264010 TET1Q8NFU7 2136 aa15.77■□□□□ 0.11
CTCF-201ENST00000264010 BRCA2P51587 3418 aa15.77■□□□□ 0.11
CTCF-201ENST00000264010 H0YAE9 185 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 MED26O95402 600 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 ENGP17813 658 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 DHCR24Q15392 516 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 ZBED5Q49AG3 693 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 FAM46CQ5VWP2 391 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 PSRC1Q6PGN9 363 aaPredicted RBP15.76■□□□□ 0.11
CTCF-201ENST00000264010 PSD4Q8NDX1 1056 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 MCCC1Q96RQ3 725 aaPredicted RBP15.76■□□□□ 0.11
CTCF-201ENST00000264010 CACYBPQ9HB71 228 aaKnown RBP15.76■□□□□ 0.11
CTCF-201ENST00000264010 ANKDD1BA6NHY2 528 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 FAM220BPB1ANY3 271 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 CCNDBP1O95273 360 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 SRPRAP08240 638 aaKnown RBP15.76■□□□□ 0.11
CTCF-201ENST00000264010 PRKACAP17612 351 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 TBC1D19Q8N5T2 526 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 C1orf52Q8N6N3 182 aaKnown RBP15.76■□□□□ 0.11
CTCF-201ENST00000264010 PROX1Q92786 737 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 PPCDCQ96CD2 204 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 CLMPQ9H6B4 373 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 FANCEQ9HB96 536 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 EHD3Q9NZN3 535 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 EBF1Q9UH73 591 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 ATP6V1HQ9UI12 483 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 USP22Q9UPT9 525 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 SUV39H1O43463 412 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 LRRC74AQ0VAA2 488 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 SELPLGQ14242 412 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 CACUL1Q86Y37 369 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 PHC2Q8IXK0 858 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 ASB12Q8WXK4 309 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 PYURFQ96I23 114 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 P2RY13Q9BPV8 354 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 EFCAB11Q9BUY7 163 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 CCDC177Q9NQR7 707 aaPredicted RBP15.76■□□□□ 0.11
CTCF-201ENST00000264010 PATJQ8NI35 1801 aa15.76■□□□□ 0.11
CTCF-201ENST00000264010 NOBOXO60393 691 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 TIMP2P16035 220 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 EFNA1P20827 205 aaPredicted RBP15.75■□□□□ 0.11
CTCF-201ENST00000264010 DOC2AQ14183 400 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 RUNDC3AQ59EK9 446 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 TMC8Q8IU68 726 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 RDH12Q96NR8 316 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 OSGEPL1Q9H4B0 414 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 MTG2Q9H4K7 406 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 FABP3P05413 133 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 GSTM1P09488 218 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 IGFBP5P24593 272 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 CXCR2P25025 360 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 GSTM4Q03013 218 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 LAPTM5Q13571 262 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 GTDC1Q4AE62 458 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 SPIN4Q56A73 249 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 KCTD8Q6ZWB6 473 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 ZSWIM9Q86XI8 627 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 APIPQ96GX9 242 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 PCDHB14Q9Y5E9 798 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 GMPPBQ9Y5P6 360 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 PRR23AA6NEV1 266 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 CCDC182A6NF36 153 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 HIDE1A8MVS5 230 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 BTN3A3O00478 584 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 SMIM18P0DKX4 95 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 HSD3B1P14060 373 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 HSD3B2P26439 372 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 ERVFC1P60507 584 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 LRRC26Q2I0M4 334 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 C8orf82Q6P1X6 216 aaPredicted RBP15.75■□□□□ 0.11
CTCF-201ENST00000264010 DLEU7Q6UYE1 221 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 RTL10Q7L3V2 364 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 MYLIPQ8WY64 445 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 GORASP2Q9H8Y8 452 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 EDDM13A0A1B0GTR0 161 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 PCDH7O60245 1069 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 CDK9P50750 372 aaKnown RBP15.75■□□□□ 0.11
CTCF-201ENST00000264010 ZNF33BQ06732 778 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 CNTN1Q12860 1018 aa15.75■□□□□ 0.11
CTCF-201ENST00000264010 PLA2G4EQ3MJ16 856 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms