RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 TMEM130Q8N3G9 435 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 ZFP41Q8N8Y5 198 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 TMEM80Q96HE8 168 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 ACBD6Q9BR61 282 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 PNO1Q9NRX1 252 aaKnown RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 EEF1E1O43324 174 aaKnown RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 GJA1P17302 382 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 LCN1P31025 176 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 MASP1P48740 699 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 RGS19P49795 217 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 FAM76BQ5HYJ3 339 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 ZDHHC20Q5W0Z9 365 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 SUSD1Q6UWL2 747 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 GALNT10Q86SR1 603 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 PACRGLQ8N7B6 248 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 ZNF557Q8N988 423 aaPredicted RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 CMASQ8NFW8 434 aaPredicted RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 OR5M3Q8NGP4 307 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 OR2L8Q8NGY9 312 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 RIOK2Q9BVS4 552 aaKnown RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 NSUN3Q9H649 340 aaKnown RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 GPN3Q9UHW5 284 aaPredicted RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 DNMT3AQ9Y6K1 912 aaPredicted RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 VILLO15195 856 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 CDKN1CP49918 316 aaPredicted RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 PON2Q15165 354 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 ARSIQ5FYB1 569 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 FBXO27Q8NI29 283 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 LRCH3Q96II8 777 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 OR51I1Q9H343 314 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 MFSD1Q9H3U5 465 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 MINDY3Q9H8M7 445 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 HCN2Q9UL51 889 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 DISP2A7MBM2 1401 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 A0A1W2PP18 115 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 MANBAO00462 879 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 NDUFS4O43181 175 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 ENTPD6O75354 484 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 RFPL1O75677 317 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 PRPS1L1P21108 318 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 TUBG1P23258 451 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 CLCN7P51798 805 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 SULT2A1Q06520 285 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 KCNAB2Q13303 367 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 KIAA1614Q5VZ46 1190 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 SLC25A25Q6KCM7 469 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 SLC39A4Q6P5W5 647 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 CYP4V2Q6ZWL3 525 aaPredicted RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 ELMOD2Q8IZ81 293 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 ZNF101Q8IZC7 436 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 GEMIN6Q8WXD5 167 aaKnown RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 DPCDQ9BVM2 203 aaPredicted RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 SIGLEC1Q9BZZ2 1709 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 GDAP2Q9NXN4 497 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 SIRPGQ9P1W8 387 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 MRTO4Q9UKD2 239 aaKnown RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 TIMM8BQ9Y5J9 83 aaPredicted RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 TNFRSF10BO14763 440 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 HOXA10P31260 410 aaPredicted RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 HOXD13P35453 343 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 SLC6A9P48067 706 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 RPS13P62277 151 aaKnown RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 CDK6Q00534 326 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 DUSP28Q4G0W2 176 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 ZNF678Q5SXM1 525 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 DOK4Q8TEW6 326 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 AUTS2Q8WXX7 1259 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 ZNF471Q9BX82 626 aaPredicted RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 PAK1IP1Q9NWT1 392 aaPredicted RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 LYARQ9NX58 379 aaKnown RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 STOX2Q9P2F5 926 aaPredicted RBP11.72□□□□□ -0.53
SMG6-201ENST00000263073 CYTH4Q9UIA0 394 aa11.72□□□□□ -0.53
SMG6-201ENST00000263073 PCBP1Q15365 356 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMG6-201ENST00000263073 NANOGP8Q6NSW7 305 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 FUT10Q6P4F1 479 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 MBOAT1Q6ZNC8 495 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 CCDC28AQ8IWP9 274 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 GPR135Q8IZ08 494 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 SLCO2A1Q92959 643 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 TMEM168Q9H0V1 697 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 SRMSQ9H3Y6 488 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 NANOGQ9H9S0 305 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 TPT1P8Q9HAU6 139 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 TAC3Q9UHF0 121 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 COLEC10Q9Y6Z7 277 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 A0A1B0GV50 99 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 ZNF20P17024 532 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 PTX3P26022 381 aaPredicted RBP11.71□□□□□ -0.53
SMG6-201ENST00000263073 HTR2BP41595 481 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 CDH11P55287 796 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 TAS2R50P59544 299 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 ID2Q02363 134 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 ASCC1Q8N9N2 400 aaKnown RBP11.71□□□□□ -0.53
SMG6-201ENST00000263073 PSD4Q8NDX1 1056 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 OR2AJ1Q8NGZ0 328 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 KLRG1Q96E93 195 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 ZNF285Q96NJ3 590 aa11.71□□□□□ -0.53
SMG6-201ENST00000263073 TSSK6Q9BXA6 273 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms